Functional clusters 
Information
- Type
- GO term
- Identifier
- GO:0016614
- Description
- oxidoreductase activity, acting on CH-OH group of donors
Cluster overview
Exact GO match
Click table-header(s) to enable sorting
| Species | Chromosome | Experiment | Cluster_id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Fragaria vesca | LG6 | 1 | CH_fve_282 | 3 | 4 | 0.000631843 |
| Sorghum bicolor | chr_1 | 1 | CH_sbi_281 | 3 | 3 | 0.000923834 |
| Theobroma cacao | Tc06 | 2 | CH_tca_33 | 3 | 5 | 0.000532939 |
| Vitis vinifera | chr14 | 1 | CH_vvi_349 | 4 | 7 | 0.000274748 |
Child GO matches
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| Species | Chromosome | Experiment | Cluster_id | Cluster size | Number of genes | E-value | GO | Description |
|---|---|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_2 | 1 | CH_aly_251 | 2 | 2 | 0.000378824 | GO:0004450 | isocitrate dehydrogenase (NADP+) activity |
| Arabidopsis lyrata | scaffold_2 | 1 | CH_aly_85 | 4 | 6 | 0.0000000677291 | GO:0004033 | aldo-keto reductase activity |
| Arabidopsis lyrata | scaffold_5 | 1 | CH_aly_253 | 2 | 2 | 0.000378824 | GO:0003845 | 11-beta-hydroxysteroid dehydrogenase activity |
| Arabidopsis lyrata | scaffold_7 | 1 | CH_aly_101 | 3 | 4 | 0.000000239168 | GO:0046029 | mannitol dehydrogenase activity |
| Arabidopsis thaliana | 1 | 1 | CH_ath_81 | 4 | 6 | 0.00000000199212 | GO:0004022 | alcohol dehydrogenase (NAD) activity |
| Arabidopsis thaliana | 1 | 1 | CH_ath_82 | 4 | 6 | 0.00000000199212 | GO:0004033 | aldo-keto reductase activity |
| Chlamydomonas reinhardtii | chromosome_14 | 1 | CH_cre_28 | 3 | 25 | 0.000201197 | GO:0004473 | malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity |
| Chlamydomonas reinhardtii | chromosome_16 | 1 | CH_cre_48 | 2 | 2 | 0.000725295 | GO:0004023 | alcohol dehydrogenase activity, metal ion-independent |
| Glycine max | Gm07 | 1 | CH_gma_176 | 4 | 4 | 0.00000439129 | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| Glycine max | Gm11 | 1 | CH_gma_219 | 2 | 2 | 0.0000431928 | GO:0010301 | xanthoxin dehydrogenase activity |
| Malus domestica | 2 | 1 | CH_mdo_192 | 3 | 3 | 0.000471215 | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| Populus trichocarpa | scaffold_14 | 1 | CH_ptr_383 | 3 | 3 | 0.000997484 | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| Ricinus communis | 29636 | 1 | CH_rco_143 | 2 | 2 | 0.0000981981 | GO:0004457 | lactate dehydrogenase activity |
| Ricinus communis | 30174 | 1 | CH_rco_98 | 4 | 5 | 0.00000739637 | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| Sorghum bicolor | chr_1 | 1 | CH_sbi_16 | 7 | 9 | 2.13247e-18 | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity |
| Selaginella moellendorffii | scaffold_0 | 1 | CH_smo_101 | 2 | 2 | 0.000560224 | GO:0016995 | cholesterol oxidase activity |
| Selaginella moellendorffii | scaffold_18 | 1 | CH_smo_21 | 3 | 3 | 0.0000000523109 | GO:0004399 | histidinol dehydrogenase activity |
| Selaginella moellendorffii | scaffold_18 | 2 | CH_smo_1 | 3 | 3 | 0.0000000618068 | GO:0004399 | histidinol dehydrogenase activity |
| Theobroma cacao | Tc01 | 1 | CH_tca_262 | 2 | 2 | 0.000129676 | GO:0004455 | ketol-acid reductoisomerase activity |
Functional clusters experiments
| Experiment | Type | Description | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | C_Hunter | GO | 2 | 30 | 80 | 0.001 | X |
| 2 | C_Hunter | GO | 2 | 30 | 80 | 0.001 | V |
| 3 | C_Hunter | GO | 10 | 150 | 300 | 0.001 | X |
| 4 | C_Hunter | GO | 10 | 150 | 300 | 0.001 | V |