InterPro domain page  


InterPro id
IPR001790
Description
Ribosomal protein L10
Number of genes
129

InterPro distribution

aly
Arabidopsis lyrata(5 genes)
ath
Arabidopsis thaliana(6 genes)
bdi
Brachypodium distachyon(5 genes)
cpa
Carica papaya(4 genes)
cre
Chlamydomonas reinhardtii(3 genes)
gma
Glycine max(10 genes)
lja
Lotus japonicus(5 genes)
mdo
Malus domestica(9 genes)
mes
Manihot esculenta(10 genes)
mrcc299
Micromonas sp. RCC299(2 genes)
mtr
Medicago truncatula(6 genes)
olu
Ostreococcus lucimarinus(3 genes)
osa
Oryza sativa ssp. japonica(7 genes)
osaindica
Oryza sativa ssp. indica(6 genes)
ota
Ostreococcus tauri(2 genes)
ppa
Physcomitrella patens(6 genes)
ptr
Populus trichocarpa(6 genes)
rco
Ricinus communis(4 genes)
sbi
Sorghum bicolor(6 genes)
smo
Selaginella moellendorffii(13 genes)
vca
Volvox carteri(3 genes)
vvi
Vitis vinifera(2 genes)
zma
Zea mays(6 genes)
 
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Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 129 total, starting on record 1, ending on 20

gene_id species description comment strand chr type
AL3G11660 aly name=fgenesh2_kg.3__1166__AT3G11250.1;pid=478465;prot=eq;tid=478465 + scaffold_3 coding
AL4G26680 aly name=fgenesh2_kg.4__2101__AT2G40010.1;pid=483041;prot=eq;tid=483041 - scaffold_4 coding
AL3G09360 aly name=fgenesh2_kg.3__936__AT3G09200.1;pid=478235;prot=eq;tid=478235 - scaffold_3 coding
AL6G13240 aly name=fgenesh2_kg.6__1307__AT5G13510.1;pid=488173;prot=eq;tid=488173 + scaffold_6 coding
AL3G12820 aly name=scaffold_301418.1;pid=897448;prot=eq;tid=928961 - scaffold_3 coding
AT3G09200 ath 60S acidic ribosomal protein P0 (RPP0B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to salt stress, response to cold, translation; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein P0 (RPP0C) (TAIR:AT3G11250.1); Has 1212 Blast hits to 1209 proteins in 357 species: Archae - 223; Bacteria - 1; Metazoa - 420; Fungi - 182; Plants - 109; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).;60S acidic ribosomal protein P0 (RPP0B) transcript=eq;prot=eq; - 3 coding
AT3G11250 ath 60S acidic ribosomal protein P0 (RPP0C); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to salt stress, translation; LOCATED IN: cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein P0 (RPP0B) (TAIR:AT3G09200.1); Has 1503 Blast hits to 1500 proteins in 380 species: Archae - 223; Bacteria - 1; Metazoa - 578; Fungi - 277; Plants - 141; Viruses - 0; Other Eukaryotes - 283 (source: NCBI BLink).;60S acidic ribosomal protein P0 (RPP0C) transcript=eq;prot=eq; + 3 coding
AT5G13510 ath ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 4252 Blast hits to 4252 proteins in 1286 species: Archae - 70; Bacteria - 2609; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 1530 (source: NCBI BLink).;ribosomal protein L10 family protein transcript=eq;prot=eq; + 5 coding
AT3G12370 ath ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: ribosomal protein L10 family protein (TAIR:AT5G13510.1); Has 2905 Blast hits to 2905 proteins in 855 species: Archae - 0; Bacteria - 1744; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1122 (source: NCBI BLink).;ribosomal protein L10 family protein transcript=eq;prot=eq; - 3 coding
AT2G40010 ath 60S acidic ribosomal protein P0 (RPP0A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein P0 (RPP0B) (TAIR:AT3G09200.1); Has 1215 Blast hits to 1213 proteins in 358 species: Archae - 223; Bacteria - 4; Metazoa - 421; Fungi - 185; Plants - 112; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink).;60S acidic ribosomal protein P0 (RPP0A) transcript=eq;prot=eq; - 2 coding
AT1G25260 ath acidic ribosomal protein P0-related; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein P0 (RPP0C) (TAIR:AT3G11250.1); Has 809 Blast hits to 807 proteins in 249 species: Archae - 78; Bacteria - 0; Metazoa - 294; Fungi - 172; Plants - 102; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).;acidic ribosomal protein P0-related transcript=eq;prot=eq; - 1 coding
BD4G44960 bdi name=Bradi4g44960.1;transcript=eq;prot=eq + Bd4 coding
BD2G37810 bdi name=Bradi2g37810.1;transcript=eq;prot=eq + Bd2 coding
BD3G19390 bdi name=Bradi3g19390.1;transcript=eq;prot=eq - Bd3 coding
BD1G65900 bdi name=Bradi1g65900.1;transcript=eq;prot=eq + Bd1 coding
BD3G14340 bdi name=Bradi3g14340.1;transcript=eq;prot=eq - Bd3 coding
CP00002G00240 cpa name=evm.TU.supercontig_2.24;pid=evm.TU.supercontig_2.24;prot=eq;transcript=eq - supercontig_2 coding
CP00112G00400 cpa name=evm.TU.supercontig_112.40;pid=evm.TU.supercontig_112.40;prot=eq;transcript=eq + supercontig_112 coding
CP00019G02040 cpa name=evm.TU.supercontig_19.205;pid=evm.TU.supercontig_19.205;prot=eq;transcript=eq - supercontig_19 coding
CP00001G02690 cpa name=evm.TU.supercontig_1.269;pid=evm.TU.supercontig_1.269;prot=eq;transcript=eq + supercontig_1 coding
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