Gene Overview  


General information


Gene id
AT4G34480
Species
Arabidopsis thaliana
Transcript
AT4G34480.1
Coordinates
16481147 - 16483988
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000018   1771 genes in 23 species
Sub family
ORTHO002747   30 genes in 17 species
Duplication type
Block duplicate
Description
catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (TAIR:AT2G16230.1); Has 1388 Blast hits to 1379 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 1380; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).;catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR012946 X8
IPR000490 Glycoside hydrolase, family 17
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR017853 Glycoside hydrolase, catalytic core
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Gene ids in other PLAZA versions


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