Sub-family  

Parent family
HOM000019
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (10 genes)
ath
Arabidopsis thaliana (10 genes)
bdi
Brachypodium distachyon (8 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (22 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (12 genes)
mes
Manihot esculenta (17 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (9 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (8 genes)
osaindica
Oryza sativa ssp. indica (7 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (7 genes)
ptr
Populus trichocarpa (7 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (6 genes)
smo
Selaginella moellendorffii (4 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (6 genes)
zma
Zea mays (9 genes)



The gene family ORTHO000044 has 161 genes in 23 species (0 outlier genes).
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Index of genes with 1 constraints:

Page 1 of 9, showing 20 records out of 161 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G05960 aly name=fgenesh2_kg.1__610__AT1G06390.1;pid=470656;prot=eq;tid=470656 + scaffold_1 No
AL1G09600 aly name=fgenesh2_kg.1__1047__AT1G09840.4;pid=471093;prot=eq;tid=471093 - scaffold_1 No
AL2G07950 aly name=fgenesh2_kg.2__585__AT1G57870.1;pid=475455;prot=eq;tid=475455 + scaffold_2 No
AL3G05820 aly name=fgenesh2_kg.3__579__AT3G05840.1;pid=477878;prot=eq;tid=477878 + scaffold_3 No
AL4G15740 aly name=scaffold_401613.1;pid=902112;prot=eq;tid=933625 - scaffold_4 No
AL5G31800 aly name=fgenesh2_kg.5__2579__AT3G61160.1;pid=486587;prot=eq;tid=486587 + scaffold_5 No
AL6G14430 aly name=fgenesh2_kg.6__1439__AT5G14640.1;pid=488305;prot=eq;tid=488305 - scaffold_6 No
AL6G26950 aly name=fgenesh2_kg.6__2637__AT5G26751.1;pid=489503;prot=eq;tid=489503 - scaffold_6 No
AL6G40920 aly name=fgenesh2_kg.6__3632__AT4G00720.1;pid=490498;prot=eq;tid=490498 + scaffold_6 No
AL7G23960 aly name=scaffold_702548.1;pid=914806;prot=eq;tid=946319 - scaffold_7 No
AT1G06390 ath encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.;GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); glycogen synthase kinase 3/ kinase transcript=eq;prot=eq; + 1 No
AT1G09840 ath SHAGGY-LIKE PROTEIN KINASE 41 (ATSK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42); ATP binding / protein kinase/ protein serine/threonine kinase (TAIR:AT1G57870.2); Has 75349 Blast hits to 74533 proteins in 2475 species: Archae - 36; Bacteria - 5917; Metazoa - 32063; Fungi - 7729; Plants - 14097; Viruses - 329; Other Eukaryotes - 15178 (source: NCBI BLink).;ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase transcript=eq;prot=eq; - 1 No
AT1G57870 ath ARABIDOPSIS SHAGGY-LIKE KINASE 42 (ATSK42); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase (TAIR:AT1G09840.6); Has 76330 Blast hits to 75455 proteins in 2640 species: Archae - 33; Bacteria - 5674; Metazoa - 33053; Fungi - 7700; Plants - 14404; Viruses - 352; Other Eukaryotes - 15114 (source: NCBI BLink).;ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42); ATP binding / protein kinase/ protein serine/threonine kinase transcript=eq;prot=eq; - 1 No
AT2G30980 ath Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.;ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase transcript=eq;prot=eq; - 2 No
AT3G05840 ath encodes a SHAGGY-like kinase involved in meristem organization.;ATSK12; protein kinase/ protein serine/threonine kinase transcript=eq;prot=eq; + 3 No
AT3G61160 ath shaggy-related protein kinase beta / ASK-beta (ASK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (TAIR:AT4G00720.1); Has 77717 Blast hits to 76780 proteins in 2266 species: Archae - 34; Bacteria - 5889; Metazoa - 33698; Fungi - 7803; Plants - 14511; Viruses - 397; Other Eukaryotes - 15385 (source: NCBI BLink).;shaggy-related protein kinase beta / ASK-beta (ASK2) transcript=eq;prot=eq; + 3 No
AT4G00720 ath SHAGGY-LIKE PROTEIN KINASE 32 (ATSK32); FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine protein kinase (InterPro:IPR002290), Tyrosine protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-related (InterPro:IPR017442), Serine/threonine protein kinase, active site (InterPro:IPR008271), Protein kinase-like (InterPro:IPR011009), Protein kinase, core (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase (TAIR:AT5G14640.1); Has 74054 Blast hits to 73135 proteins in 2264 species: Archae - 36; Bacteria - 5684; Metazoa - 31554; Fungi - 7580; Plants - 14010; Viruses - 325; Other Eukaryotes - 14865 (source: NCBI BLink).;ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase transcript=eq;prot=eq; - 4 No
AT4G18710 ath ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.;BIN2 (BRASSINOSTEROID-INSENSITIVE 2); glycogen synthase kinase 3/ kinase/ protein kinase transcript=eq;prot=eq; + 4 No
AT5G14640 ath SHAGGY-LIKE KINASE 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ATSK11; protein kinase/ protein serine/threonine kinase (TAIR:AT5G26751.1); Has 77993 Blast hits to 77020 proteins in 2468 species: Archae - 36; Bacteria - 6200; Metazoa - 32731; Fungi - 7832; Plants - 15487; Viruses - 357; Other Eukaryotes - 15350 (source: NCBI BLink).;SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase transcript=eq;prot=eq; - 5 No
AT5G26751 ath encodes a SHAGGY-related kinase involved in meristem organization.;ATSK11; protein kinase/ protein serine/threonine kinase transcript=eq;prot=eq; - 5 No
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