Gene family  

Sub-families
ORTHO007663 (21 genes in 16 species)
ORTHO042320 (2 genes in 2 species)
ORTHO045621 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (1 gene)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (4 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM004289 has 31 genes in 17 species (0 outlier genes).
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 31 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G16620 aly name=Al_scaffold_0004_1625;pid=869462;prot=eq;tid=900975 + scaffold_4 No
AL4G16780 aly name=Al_scaffold_0004_1640;pid=869477;prot=eq;tid=900990 - scaffold_4 No
AL4G16800 aly name=scaffold_401725.1;pid=902224;prot=eq;tid=933737 - scaffold_4 No
AL4G16810 aly name=fgenesh2_kg.4__1171__AT2G31870.2;pid=482111;prot=eq;tid=482111 - scaffold_4 No
AT2G31865 ath poly (ADP-ribose) glycohydrolase (PARG) family protein; FUNCTIONS IN: poly(ADP-ribose) glycohydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: TEJ (Sanskrit for 'bright'); poly(ADP-ribose) glycohydrolase (TAIR:AT2G31870.2); Has 278 Blast hits to 262 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 7; Plants - 25; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).;poly (ADP-ribose) glycohydrolase (PARG) family protein transcript=eq;prot=eq; - 2 No
AT2G31870 ath mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase;TEJ (Sanskrit for 'bright'); poly(ADP-ribose) glycohydrolase transcript=eq;prot=eq; - 2 No
BD1G01940 bdi name=Bradi1g01940.1;transcript=eq;prot=eq + Bd1 No
BD1G01980 bdi name=Bradi1g01980.1;transcript=eq;prot=eq + Bd1 No
BD3G35690 bdi name=Bradi3g35690.1;transcript=eq;prot=eq + Bd3 No
BD3G48340 bdi name=Bradi3g48340.1;transcript=eq;prot=eq + Bd3 No
CP00009G02410 cpa name=evm.TU.supercontig_9.241;pid=evm.TU.supercontig_9.241;prot=eq;transcript=eq + supercontig_9 No
LJ2G029830 lja partial;prot=eq;transcript=eq;scaffold=CM0018;name=chr2.CM0018.1190.nc - chr2 No
LJ2G029860 lja partial;prot=eq;transcript=eq;scaffold=CM0018;name=chr2.CM0018.1220.nc - chr2 No
LJ6G006780 lja prot=eq;transcript=eq;scaffold=CM0057;name=chr6.CM0057.140.nc - chr6 No
MD00G179500 mdo transcript=eq;prot=eq;pid=MDP0000743507;tid=MDP0000743507;contig=MDC007691.315 + MDC007691.315 No
ME03420G00020 mes name=cassava41343.m1;transcript=ne;prot=eq + scaffold03420 No
MT3G11680 mtr Poly glycohydrolase transcript=eq;prot=eq;pid=Medtr3g028610.1; - 3 No
OS03G62680 osa hypothetical protein transcript=eq;prot=eq; - 3 No
OSINDICA_03G59750 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008929; - Chr03 No
PP00013G00950 ppa NULL name=e_gw1.13.81.1,pid=115347,prot=eq,tid=115347 + scaffold_13 No
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