Gene family  

Sub-families
ORTHO003591 (28 genes in 18 species)
ORTHO032183 (3 genes in 3 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (2 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family HOM004086 has 33 genes in 19 species (0 outlier genes).
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 33 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G01870 aly name=scaffold_700193.1;pid=912451;prot=eq;tid=943964 - scaffold_7 No
AT4G39680 ath SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26630.2); Has 10132 Blast hits to 6217 proteins in 537 species: Archae - 24; Bacteria - 931; Metazoa - 3852; Fungi - 1124; Plants - 2077; Viruses - 539; Other Eukaryotes - 1585 (source: NCBI BLink).;SAP domain-containing protein transcript=eq;prot=eq; - 4 No
BD1G61000 bdi name=Bradi1g61000.1;transcript=eq;prot=eq + Bd1 No
CP00231G00100 cpa name=evm.TU.supercontig_231.10;pid=evm.TU.supercontig_231.10;prot=eq;transcript=eq + supercontig_231 No
CR03G11760 cre name=au.g11240_t1;pid=293428;prot=eq;tid=293435;transcript=eq - chromosome_3 No
GM11G36120 gma 11 pid=16285556;transcript=eq;prot=eq;name=Glyma11g36120.1 - Gm11 No
GM18G02310 gma 18 pid=16307680;transcript=eq;prot=eq;name=Glyma18g02310.1 + Gm18 No
LJ0G025030 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_012912;name=LjSGA_012912.1 - LjSGA_012912 No
LJ0G039550 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_016437;name=LjSGA_016437.2 - LjSGA_016437 No
LJ0G240900 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_079569;name=LjSGA_079569.1 + LjSGA_079569 No
MD06G012910 mdo transcript=eq;prot=eq;pid=MDP0000417845;tid=MDP0000417845;contig=MDC019010.307 - 6 No
MD15G026160 mdo transcript=eq;prot=eq;pid=MDP0000199544;tid=MDP0000199544;contig=MDC015302.219 + 15 No
ME05347G00020 mes name=cassava42034.valid.m1;transcript=eq;prot=eq + scaffold05347 No
ME05347G00030 mes name=cassava42035.valid.m1;transcript=eq;prot=eq + scaffold05347 No
ME10974G00020 mes name=cassava19115.valid.m1;transcript=eq;prot=eq + scaffold10974 No
MT3G36290 mtr Borrelia outer surface lipoprotein; DNA-binding SAP transcript=eq;prot=eq;pid=Medtr3g101020.1; - 3 No
MT4G55920 mtr hypothetical protein transcript=eq;prot=eq;pid=Medtr4g140550.1; + 4 No
OS03G26630 osa SAP domain containing protein, expressed transcript=eq;prot=eq; - 3 No
OS07G43316 osa SAP domain%2Dcontaining protein, putative, expressed transcript=eq;prot=eq; + 7 No
OSINDICA_03G25460 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006730; - Chr03 No
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