Gene family  

Sub-families
ORTHO009678 (18 genes in 10 species)
ORTHO016053 (8 genes in 7 species)
ORTHO041499 (2 genes in 2 species)
View all sub-families (4)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
cpa
Carica papaya (2 genes)
gma
Glycine max (6 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (5 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (2 genes)
vvi
Vitis vinifera (1 gene)



The gene family HOM003739 has 35 genes in 11 species (1 outlier gene).
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 35 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G09170 aly name=fgenesh2_kg.3__914__AT3G09035.1;pid=478213;prot=eq;tid=478213 + scaffold_3 No
AL3G09350 aly name=fgenesh1_pm.C_scaffold_3000737;pid=317721;prot=eq;tid=317721 - scaffold_3 No
AL6G01070 aly name=scaffold_600112.1;pid=908055;prot=eq;tid=939568 - scaffold_6 No
AT3G09035 ath legume lectin family protein; FUNCTIONS IN: carbohydrate binding, sugar binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta domain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: sugar binding (TAIR:AT3G09190.1); Has 583 Blast hits to 583 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 580; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).;legume lectin family protein transcript=eq;prot=eq; + 3 No
AT3G09190 ath Regulates flowering time in Ws ecotype.;sugar binding transcript=eq;prot=eq; - 3 No
AT5G01090 ath legume lectin family protein; FUNCTIONS IN: carbohydrate binding, sugar binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta domain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: legume lectin family protein (TAIR:AT3G09035.1); Has 738 Blast hits to 733 proteins in 51 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 730; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;legume lectin family protein transcript=eq;prot=eq; + 5 No
CP00019G02330 cpa name=evm.TU.supercontig_19.234;pid=evm.TU.supercontig_19.234;prot=eq;transcript=eq - supercontig_19 No
CP00056G00730 cpa name=evm.TU.supercontig_56.73;pid=evm.TU.supercontig_56.73;prot=eq;transcript=eq + supercontig_56 No
GM01G26940 gma 01 pid=16244534;transcript=eq;prot=eq;name=Glyma01g26940.1 + Gm01 No
GM03G15030 gma 03 pid=16251747;transcript=eq;prot=eq;name=Glyma03g15030.1 - Gm03 No
GM07G17230 gma 07 pid=16267568;transcript=eq;prot=eq;name=Glyma07g17230.1 + Gm07 No
GM11G34770 gma 11 pid=16285393;transcript=eq;prot=eq;name=Glyma11g34770.1 + Gm11 No
GM18G03540 gma 18 pid=16307809;transcript=eq;prot=eq;name=Glyma18g03540.1 - Gm18 No
GM18G41970 gma 18 pid=16310188;transcript=eq;prot=eq;name=Glyma18g41970.1 + Gm18 No
LJ1G000910 lja prot=eq;transcript=eq;scaffold=CM0088;name=chr1.CM0088.910.nc + chr1 Yes
LJ6G014840 lja partial;prot=eq;transcript=eq;scaffold=CM0539;name=chr6.CM0539.480.nd + chr6 No
MD00G303150 mdo transcript=eq;prot=eq;pid=MDP0000250667;tid=MDP0000250667;contig=MDC012883.429 - MDC012883.429 No
MD00G445760 mdo transcript=eq;prot=eq;pid=MDP0000232997;tid=MDP0000232997;contig=MDC020457.57 - MDC020457.57 No
MD00G447360 mdo transcript=eq;prot=eq;pid=MDP0000222136;tid=MDP0000222136;contig=MDC020513.193 - MDC020513.193 No
MD04G011580 mdo transcript=eq;prot=eq;pid=MDP0000168857;tid=MDP0000168857;contig=MDC003865.562 + 4 No
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