Gene family  

Sub-families
ORTHO002769 (30 genes in 17 species)
ORTHO043100 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
gma
Glycine max (5 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (6 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM003623 has 36 genes in 17 species (1 outlier gene).
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 36 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G26640 aly name=fgenesh2_kg.4__2100__AT2G40000.1;pid=483040;prot=eq;tid=483040 - scaffold_4 No
AL5G26040 aly name=fgenesh2_kg.5__2018__AT3G55840.1;pid=486026;prot=eq;tid=486026 - scaffold_5 No
AT2G40000 ath ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2 (HSPRO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, defense response to bacterium, incompatible interaction, response to salicylic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55840.1); Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2) transcript=eq;prot=eq; - 2 No
AT3G55840 ath FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2) (TAIR:AT2G40000.1); Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; - 3 No
BD2G55310 bdi name=Bradi2g55310.1;transcript=eq;prot=eq - Bd2 No
CP00019G02030 cpa name=evm.TU.supercontig_19.204;pid=evm.TU.supercontig_19.204;prot=eq;transcript=eq - supercontig_19 No
GM02G42250 gma 02 pid=16249890;transcript=eq;prot=eq;name=Glyma02g42250.1 - Gm02 No
GM11G35050 gma 11 pid=16285433;transcript=eq;prot=eq;name=Glyma11g35050.1 - Gm11 No
GM14G06640 gma 14 pid=16294599;transcript=eq;prot=eq;name=Glyma14g06640.1 + Gm14 No
GM17G15360 gma 17 pid=16305670;transcript=eq;prot=eq;name=Glyma17g15360.1 + Gm17 No
GM18G03310 gma 18 pid=16307787;transcript=eq;prot=eq;name=Glyma18g03310.1 + Gm18 No
LJ0G431810 lja partial;prot=eq;transcript=eq;scaffold=LjT13K07;name=LjT13K07.110.nd + chr0 No
LJ2G033860 lja prot=eq;transcript=eq;scaffold=LjT46G02;name=chr2.LjT46G02.50.nd + chr2 No
LJ2G034080 lja partial;prot=eq;transcript=eq;scaffold=LjT46G02;name=chr2.LjT46G02.270.nd - chr2 Yes
LJ6G004260 lja partial;prot=eq;transcript=eq;scaffold=LjT30N23;name=chr6.LjT30N23.20.nd - chr6 No
MD00G187470 mdo transcript=eq;prot=eq;pid=MDP0000889787;tid=MDP0000889787;contig=MDC008063.227 + MDC008063.227 No
MD14G016950 mdo transcript=eq;prot=eq;pid=MDP0000293002;tid=MDP0000293002;contig=MDC012914.254 - 14 No
ME00537G00500 mes name=cassava23703.valid.m1;transcript=eq;prot=eq - scaffold00537 No
ME04268G00460 mes name=cassava1270.valid.m1;transcript=eq;prot=eq - scaffold04268 No
MT3G32530 mtr Hs1pro-1, C-terminal; Hs1pro-1, N-terminal transcript=eq;prot=eq;pid=Medtr3g093280.1; - 3 No
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