Sub-family  

Id
ORTHO001091
Method
BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
Parent family
HOM000372
Keywords


Overview of gene family content



The gene family ORTHO001091 has 16 genes in 9 species (0 outlier genes).
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AT1G26830 ath Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.;ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A); protein binding / ubiquitin-protein ligase Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.;ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A); protein binding / ubiquitin-protein ligase + 1 No
AT1G69670 ath cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.;ATCUL3B/CUL3B (Cullin 3B); protein binding / ubiquitin-protein ligase cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.;ATCUL3B/CUL3B (Cullin 3B); protein binding / ubiquitin-protein ligase - 1 No
CP00128G00090 cpa + supercontig_128 No
CR00006G03230 cre + scaffold_6 No
OL03G02820 olu NULL NULL - Chr_3 No
OS02G51180 osa predicted by fgenesh;cullin-4B, putative, expressed predicted by fgenesh;cullin-4B, putative, expressed - 2 No
OS04G55030 osa predicted by fgenesh;cullin-4B, putative, expressed predicted by fgenesh;cullin-4B, putative, expressed + 4 No
OS08G07400 osa predicted by fgenesh;cullin-4B, putative, expressed predicted by fgenesh;cullin-4B, putative, expressed - 8 No
PP00031G01780 ppa NULL NULL - scaffold_31 No
PP00311G00230 ppa NULL NULL - scaffold_311 No
PT08G13840 ptr estExt_fgenesh4_pm.C_LG_VIII0640 estExt_fgenesh4_pm.C_LG_VIII0640 + LG_VIII No
PT10G07910 ptr eugene3.00100858 eugene3.00100858 - LG_X No
SB04G027970 sbi similar to Putative uncharacterized protein similar to Putative uncharacterized protein + chromosome_4 No
SB07G004560 sbi similar to Putative cullin 3B similar to Putative cullin 3B - chromosome_7 No
VV00G52600 vvi NULL NULL - chr1_random No
VV14G16020 vvi NULL NULL + chr14 No
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