Gene family  

Id
HOM001472
Method
BLASTP E_value=1e-05 MCL_I=2
Sub-families
ORTHO007852 (8 genes in 7 species)
ORTHO008953 (7 genes in 2 species)
ORTHO014698 (4 genes in 1 species)
View all sub-families (3)
Keywords


Overview of gene family content



The gene family HOM001472 has 25 genes in 7 species (1 outlier gene).
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT2G18630 ath Identical to UPF0496 protein At2g18630 [Arabidopsis Thaliana] (GB:Q56XQ0;GB:Q9ZNR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66675.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At2g18630 [Arabidopsis Thaliana] (GB:Q56XQ0;GB:Q9ZNR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66675.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) + 2 No
AT3G28270 ath Identical to UPF0496 protein At3g28270 [Arabidopsis Thaliana] (GB:Q9LHD9;GB:Q8H7D0;GB:Q8H7E9;GB:Q944H3); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At3g28270 [Arabidopsis Thaliana] (GB:Q9LHD9;GB:Q8H7D0;GB:Q8H7E9;GB:Q944H3); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) + 3 No
AT3G28290 ath Identical to UPF0496 protein At3g28290/At3g28300 [Arabidopsis Thaliana] (GB:Q9XF11;GB:Q56XE6;GB:Q8GXJ7); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749);AT14A-like Identical to UPF0496 protein At3g28290/At3g28300 [Arabidopsis Thaliana] (GB:Q9XF11;GB:Q56XE6;GB:Q8GXJ7); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749);AT14A-like + 3 No
AT3G28300 ath Possesses a transmembrane domain and a small region that has sequence similarities to integrins from fungi, insects and humans. Is localized to plasma membrane and cytoplasm.;AT14A Possesses a transmembrane domain and a small region that has sequence similarities to integrins from fungi, insects and humans. Is localized to plasma membrane and cytoplasm.;AT14A + 3 No
AT3G28310 ath similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) + 3 Yes
AT3G28320 ath Identical to UPF0496 protein At3g28310/At3g28320 [Arabidopsis Thaliana] (GB:Q6E240;GB:Q9LHD4;GB:Q9LHD5); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to Os03g0199100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At3g28310/At3g28320 [Arabidopsis Thaliana] (GB:Q6E240;GB:Q9LHD4;GB:Q9LHD5); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to Os03g0199100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) + 3 No
AT3G57100 ath Identical to UPF0496 protein At3g57100 [Arabidopsis Thaliana] (GB:Q9M1J0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At3g57100 [Arabidopsis Thaliana] (GB:Q9M1J0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) - 3 No
AT4G34320 ath Identical to UPF0496 protein At4g34320 [Arabidopsis Thaliana] (GB:Q9SYZ7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At4g34320 [Arabidopsis Thaliana] (GB:Q9SYZ7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) + 4 No
AT4G34330 ath Identical to UPF0496 protein At4g34330 [Arabidopsis Thaliana] (GB:Q9SYZ8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At4g34330 [Arabidopsis Thaliana] (GB:Q9SYZ8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) + 4 No
AT5G66660 ath Identical to UPF0496 protein At5g66660 [Arabidopsis Thaliana] (GB:Q9LVR4;GB:A0MFR6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At5g66660 [Arabidopsis Thaliana] (GB:Q9LVR4;GB:A0MFR6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) - 5 No
AT5G66670 ath Identical to UPF0496 protein At5g66670 [Arabidopsis Thaliana] (GB:Q9LVR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At5g66670 [Arabidopsis Thaliana] (GB:Q9LVR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) - 5 No
AT5G66675 ath Identical to UPF0496 protein At5g66675 [Arabidopsis Thaliana] (GB:Q8GW16); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Identical to UPF0496 protein At5g66675 [Arabidopsis Thaliana] (GB:Q8GW16); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) - 5 No
CP00062G01060 cpa - supercontig_62 No
OS03G10240 osa predicted by fgenesh;expressed protein predicted by fgenesh;expressed protein + 3 No
OS10G21540 osa predicted by fgenesh;conserved hypothetical protein predicted by fgenesh;conserved hypothetical protein + 10 No
PP00029G00420 ppa NULL NULL + scaffold_29 No
PT00G09040 ptr fgenesh4_pm.C_scaffold_57000105 fgenesh4_pm.C_scaffold_57000105 + scaffold_57 No
PT00G09045 ptr eugene3.00570225 eugene3.00570225 + scaffold_57 No
PT04G11110 ptr gw1.IV.409.1 gw1.IV.409.1 - LG_IV No
PT07G09790 ptr eugene3.00071032 eugene3.00071032 - LG_VII No
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