Gene family 
- Id
- HOM001472
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sub-families
-
ORTHO007852 (8 genes in 7 species)
ORTHO008953 (7 genes in 2 species)
ORTHO014698 (4 genes in 1 species)
View all sub-families (3)
- Keywords
-
Overview of gene family content
- ath
- Arabidopsis thaliana (12 genes)
- ptr
- Populus trichocarpa (6 genes)
- osa
- Oryza sativa (2 genes)
- vvi
- Vitis vinifera (2 genes)
- ppa
- Physcomitrella patens (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- cpa
- Carica papaya (1 gene)
The gene family HOM001472 has 25 genes in 7 species (1 outlier gene).
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Index of genes with 1 constraints:
- gene family : HOM001472
Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AT2G18630 | ath | Identical to UPF0496 protein At2g18630 [Arabidopsis Thaliana] (GB:Q56XQ0;GB:Q9ZNR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66675.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At2g18630 [Arabidopsis Thaliana] (GB:Q56XQ0;GB:Q9ZNR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66675.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | + | 2 | No |
| AT3G28270 | ath | Identical to UPF0496 protein At3g28270 [Arabidopsis Thaliana] (GB:Q9LHD9;GB:Q8H7D0;GB:Q8H7E9;GB:Q944H3); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At3g28270 [Arabidopsis Thaliana] (GB:Q9LHD9;GB:Q8H7D0;GB:Q8H7E9;GB:Q944H3); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | + | 3 | No |
| AT3G28290 | ath | Identical to UPF0496 protein At3g28290/At3g28300 [Arabidopsis Thaliana] (GB:Q9XF11;GB:Q56XE6;GB:Q8GXJ7); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749);AT14A-like | Identical to UPF0496 protein At3g28290/At3g28300 [Arabidopsis Thaliana] (GB:Q9XF11;GB:Q56XE6;GB:Q8GXJ7); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749);AT14A-like | + | 3 | No |
| AT3G28300 | ath | Possesses a transmembrane domain and a small region that has sequence similarities to integrins from fungi, insects and humans. Is localized to plasma membrane and cytoplasm.;AT14A | Possesses a transmembrane domain and a small region that has sequence similarities to integrins from fungi, insects and humans. Is localized to plasma membrane and cytoplasm.;AT14A | + | 3 | No |
| AT3G28310 | ath | similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | + | 3 | Yes |
| AT3G28320 | ath | Identical to UPF0496 protein At3g28310/At3g28320 [Arabidopsis Thaliana] (GB:Q6E240;GB:Q9LHD4;GB:Q9LHD5); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to Os03g0199100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At3g28310/At3g28320 [Arabidopsis Thaliana] (GB:Q6E240;GB:Q9LHD4;GB:Q9LHD5); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28300.1); similar to Os03g0199100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | + | 3 | No |
| AT3G57100 | ath | Identical to UPF0496 protein At3g57100 [Arabidopsis Thaliana] (GB:Q9M1J0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At3g57100 [Arabidopsis Thaliana] (GB:Q9M1J0); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | - | 3 | No |
| AT4G34320 | ath | Identical to UPF0496 protein At4g34320 [Arabidopsis Thaliana] (GB:Q9SYZ7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At4g34320 [Arabidopsis Thaliana] (GB:Q9SYZ7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | + | 4 | No |
| AT4G34330 | ath | Identical to UPF0496 protein At4g34330 [Arabidopsis Thaliana] (GB:Q9SYZ8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At4g34330 [Arabidopsis Thaliana] (GB:Q9SYZ8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47666.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | + | 4 | No |
| AT5G66660 | ath | Identical to UPF0496 protein At5g66660 [Arabidopsis Thaliana] (GB:Q9LVR4;GB:A0MFR6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At5g66660 [Arabidopsis Thaliana] (GB:Q9LVR4;GB:A0MFR6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | - | 5 | No |
| AT5G66670 | ath | Identical to UPF0496 protein At5g66670 [Arabidopsis Thaliana] (GB:Q9LVR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At5g66670 [Arabidopsis Thaliana] (GB:Q9LVR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | - | 5 | No |
| AT5G66675 | ath | Identical to UPF0496 protein At5g66675 [Arabidopsis Thaliana] (GB:Q8GW16); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | Identical to UPF0496 protein At5g66675 [Arabidopsis Thaliana] (GB:Q8GW16); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) | - | 5 | No |
| CP00062G01060 | cpa | - | supercontig_62 | No | ||
| OS03G10240 | osa | predicted by fgenesh;expressed protein | predicted by fgenesh;expressed protein | + | 3 | No |
| OS10G21540 | osa | predicted by fgenesh;conserved hypothetical protein | predicted by fgenesh;conserved hypothetical protein | + | 10 | No |
| PP00029G00420 | ppa | NULL | NULL | + | scaffold_29 | No |
| PT00G09040 | ptr | fgenesh4_pm.C_scaffold_57000105 | fgenesh4_pm.C_scaffold_57000105 | + | scaffold_57 | No |
| PT00G09045 | ptr | eugene3.00570225 | eugene3.00570225 | + | scaffold_57 | No |
| PT04G11110 | ptr | gw1.IV.409.1 | gw1.IV.409.1 | - | LG_IV | No |
| PT07G09790 | ptr | eugene3.00071032 | eugene3.00071032 | - | LG_VII | No |