Gene: SPBC2G5.03 (Schizosaccharomyces pombe)

Overview top

Gene Identifier
SPBC2G5.03
Transcript Identifier
SPBC2G5.03.1
Gene Type
Coding gene
Location
II : 2581957-2582964 : positive

Family Information

Homologous gene family
HOM03P003367
(29 genes in 24 species)
specific family

Descriptions

gene_descr
cytosolic thiouridylase subunit Ctu1

Identifiers

Type Value
pidSPBC2G5.03.1:pep
UniprotO94282

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
ISS
IEA
Genome ProjecttRNA wobble uridine modification
GO:0002143
IDA, IMP
Genome ProjecttRNA wobble position uridine thiolation
GO:0002182
NAS
Genome Projectcytoplasmic translational elongation
GO:0006450
IMP
Genome Projectregulation of translational fidelity
GO:0008033
IEA
Genome ProjecttRNA processing
GO:0008360
IMP
Genome Projectregulation of cell shape
GO:0032447
ISO
IEA
Genome Projectprotein urmylation
GO:0034227
ISS
IEA
Genome ProjecttRNA thio-modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000049
ISS
IEA
Genome ProjecttRNA binding
GO:0003723
IEA
Genome ProjectRNA binding
GO:0005515
IPI
Genome Projectprotein binding
GO:0005524
ISM
Genome ProjectATP binding
GO:0016740
IEA
Genome Projecttransferase activity
GO:0016779
IEA
Genome Projectnucleotidyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002144
IDA
Genome Projectcytosolic tRNA wobble base thiouridylase complex
GO:0005737
IEA
Genome Projectcytoplasm
GO:0005829
ISS
Genome Projectcytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000541Cytoplasmic tRNA 2-thiolation protein 1
IPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
IPR0120892-thiocytidine tRNA biosynthesis protein, TtcA
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR020554Uncharacterised protein family UPF0021, conserved site
IPR032442Cytoplasmic tRNA 2-thiolation protein 1, C-terminal

No MapMan annotations defined for this gene.