Gene: SPBC19C2.14 (Schizosaccharomyces pombe)

Overview top

Gene Identifier
SPBC19C2.14
Transcript Identifier
SPBC19C2.14.1
Gene Type
Coding gene
Location
II : 1702182-1702628 : positive

Family Information

Homologous gene family
HOM03P001256
(54 genes in 37 species)
specific family
Orthologous gene family
ORTHO03P000529
(48 genes in 37 species)
specific family

Descriptions

gene_descr
Sm snRNP core protein Smd3

Identifiers

Type Value
pidSPBC19C2.14.1:pep
UniprotQ9UUC6

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000245
IBA
Genome Projectspliceosomal complex assembly
GO:0000387
IBA
Genome Projectspliceosomal snRNP assembly
GO:0000395
IC
Genome ProjectmRNA 5'-splice site recognition
GO:0006396
IEA
Genome ProjectRNA processing
GO:0006397
IEA
Genome ProjectmRNA processing
GO:0008380
IEA
Genome ProjectRNA splicing
GO:0045292
ISS
IC
Genome ProjectmRNA cis splicing, via spliceosome
GO:0070317
IMP
Genome Projectnegative regulation of G0 to G1 transition
GO:1990141
IMP
Genome Projectchromatin silencing at centromere outer repeat region

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
Genome ProjectRNA binding
GO:0003729
ISS
Genome ProjectmRNA binding
GO:0005515
IPI
Genome Projectprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000243
ISS, IBA
Genome Projectcommitment complex
GO:0005634
IDA
IEA
Genome Projectnucleus
GO:0005681
IDA
Genome Projectspliceosomal complex
GO:0005682
IBA
Genome ProjectU5 snRNP
GO:0005685
IDA
Genome ProjectU1 snRNP
GO:0005686
IDA
Genome ProjectU2 snRNP
GO:0005687
IBA
Genome ProjectU4 snRNP
GO:0005689
IBA
Genome ProjectU12-type spliceosomal complex
GO:0030529
IEA
Genome Projectintracellular ribonucleoprotein complex
GO:0034715
IBA
Genome ProjectpICln-Sm protein complex
GO:0034719
IBA
Genome ProjectSMN-Sm protein complex
GO:0046540
ISS
Genome ProjectU4/U6 x U5 tri-snRNP complex
GO:0071004
ISO
Genome ProjectU2-type prespliceosome
GO:0071010
IBA
Genome Projectprespliceosome
GO:0071011
IBA
Genome Projectprecatalytic spliceosome
GO:0071013
IBA
Genome Projectcatalytic step 2 spliceosome
GO:0097526
IBA
Genome Projectspliceosomal tri-snRNP complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001163LSM domain, eukaryotic/archaea-type
IPR010920LSM domain
IPR027141Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3

No MapMan annotations defined for this gene.