Gene: ENSMUSG00000038290 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000038290
Transcript Identifier
ENSMUST00000045281
Gene Type
Coding gene
Location
11 : 74925916-75162950 : positive

Family Information

Homologous gene family
HOM03P003009
(32 genes in 22 species)
specific family
Orthologous gene family
ORTHO03P043009
(3 genes in 3 species)
specific family

Descriptions

gene_descr
Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)

Identifiers

Type Value
UniprotP61406
MGI2144117

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
ISS, ISO
IEA
Genome Projectnuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000723
ISS, ISO
IEA
Genome Projecttelomere maintenance
GO:0090502
ISO
IEA
Genome ProjectRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
Genome ProjectDNA binding
GO:0004518
IEA
Genome Projectnuclease activity
GO:0004519
IEA
Genome Projectendonuclease activity
GO:0004521
ISS, ISO
IEA
Genome Projectendoribonuclease activity
GO:0016787
IEA
Genome Projecthydrolase activity
GO:0042162
ISS, ISO
IEA
Genome Projecttelomeric DNA binding
GO:0046872
IEA
Genome Projectmetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000781
IEA
Genome Projectchromosome, telomeric region
GO:0005634
ISS, ISO
IEA
Genome Projectnucleus
GO:0005694
IEA
Genome Projectchromosome
GO:0005730
ISO
IEA
Genome Projectnucleolus
GO:0005737
ISS, ISO
IEA
Genome Projectcytoplasm
GO:0005829
ISS, ISO
IEA
Genome Projectcytosol
GO:0035145
ISS, ISO
IEA
Genome Projectexon-exon junction complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002716PIN domain
IPR011990Tetratricopeptide-like helical domain
IPR018834DNA/RNA-binding domain, Est1-type
IPR019458Telomerase activating protein Est1
IPR029060PIN domain-like

No MapMan annotations defined for this gene.