Gene: ENSMUSG00000031683 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000031683
Transcript Identifier
ENSMUST00000051867
Gene Type
Coding gene
Location
8 : 78808211-78813069 : negative

Family Information

Homologous gene family
HOM03P000635
(83 genes in 37 species)
specific family
Orthologous gene family
ORTHO03P001247
(39 genes in 33 species)
specific family

Descriptions

gene_descr
LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Identifiers

Type Value
UniprotP62313
UniprotQ542U7
MGI1925901

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
IEA
Genome ProjectmRNA splicing, via spliceosome
GO:0006364
IEA
Genome ProjectrRNA processing
GO:0006397
IEA
Genome ProjectmRNA processing
GO:0006402
ISO
Genome ProjectmRNA catabolic process
GO:0008033
IEA
Genome ProjecttRNA processing
GO:0008380
IEA
Genome ProjectRNA splicing
GO:0030490
IBA
Genome Projectmaturation of SSU-rRNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
Genome ProjectRNA binding
GO:0044822
ISO
IEA
Genome Projectpoly(A) RNA binding
GO:0046982
ISO
Genome Projectprotein heterodimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000932
IBA
Genome Projectcytoplasmic mRNA processing body
GO:0005634
IEA
Genome Projectnucleus
GO:0005681
IEA
Genome Projectspliceosomal complex
GO:0005688
IBA
Genome ProjectU6 snRNP
GO:0005730
IBA
Genome Projectnucleolus
GO:0005732
IBA
IEA
Genome Projectsmall nucleolar ribonucleoprotein complex
GO:0005737
ISO
IEA
Genome Projectcytoplasm
GO:0030529
IEA
Genome Projectintracellular ribonucleoprotein complex
GO:0046540
IBA
Genome ProjectU4/U6 x U5 tri-snRNP complex
GO:0070062
ISO
IEA
Genome Projectextracellular exosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001163LSM domain, eukaryotic/archaea-type
IPR010920LSM domain
IPR016487Sm-like protein Lsm6/SmF

No MapMan annotations defined for this gene.