Gene: ENSMUSG00000029238 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000029238
Transcript Identifier
ENSMUST00000075159
Gene Type
Coding gene
Location
5 : 76216699-76266846 : negative

Family Information

Homologous gene family
HOM03P012842
(6 genes in 3 species)
specific family
Duplication type
Block duplicate

Descriptions

gene_descr
circadian locomotor output cycles kaput

Identifiers

Type Value
UniprotO08785
MGI99698

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000077
ISO
IEA
Genome ProjectDNA damage checkpoint
GO:0006351
IEA
Genome Projecttranscription, DNA-templated
GO:0006355
IDA
IEA
Genome Projectregulation of transcription, DNA-templated
GO:0006366
IDA
IC
Genome Projecttranscription from RNA polymerase II promoter
GO:0006974
IEA
Genome Projectcellular response to DNA damage stimulus
GO:0007283
IMP
Genome Projectspermatogenesis
GO:0007623
IDA, IMP, IEP
TAS
Genome Projectcircadian rhythm
GO:0009649
IEA
Genome Projectentrainment of circadian clock
GO:0016573
ISO
Genome Projecthistone acetylation
GO:0032922
IMP
ISO
Genome Projectcircadian regulation of gene expression
GO:0042634
ISS, ISO
IEA
Genome Projectregulation of hair cycle
GO:0043161
IDA
Genome Projectproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045892
IDA
Genome Projectnegative regulation of transcription, DNA-templated
GO:0045893
IDA, IMP
ISO
Genome Projectpositive regulation of transcription, DNA-templated
GO:0045944
IDA, IGI
ISO
IEA
Genome Projectpositive regulation of transcription from RNA polymerase II promoter
GO:0048511
IEA
Genome Projectrhythmic process
GO:0050729
IMP
Genome Projectpositive regulation of inflammatory response
GO:0050796
IMP
Genome Projectregulation of insulin secretion
GO:0051092
IMP
Genome Projectpositive regulation of NF-kappaB transcription factor activity
GO:0051775
ISS, ISO
IEA
Genome Projectresponse to redox state
GO:0071479
ISO
IEA
Genome Projectcellular response to ionizing radiation
GO:2000074
IMP
Genome Projectregulation of type B pancreatic cell development
GO:2000323
IDA
Genome Projectnegative regulation of glucocorticoid receptor signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000978
ISO
IEA
Genome ProjectRNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000982
IDA
Genome Projecttranscription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0001046
IDA
Genome Projectcore promoter sequence-specific DNA binding
GO:0001047
IDA
Genome Projectcore promoter binding
GO:0001077
IC
Genome Projecttranscriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0001190
IDA
Genome Projecttranscriptional activator activity, RNA polymerase II transcription factor binding
GO:0003677
ISS, ISO
IEA
Genome ProjectDNA binding
GO:0003700
IDA
ISA
IEA
Genome Projecttranscription factor activity, sequence-specific DNA binding
GO:0004402
IMP
ISO
IEA
Genome Projecthistone acetyltransferase activity
GO:0005515
IPI
Genome Projectprotein binding
GO:0008134
ISA
Genome Projecttranscription factor binding
GO:0016740
IEA
Genome Projecttransferase activity
GO:0016746
IEA
Genome Projecttransferase activity, transferring acyl groups
GO:0031490
IDA
Genome Projectchromatin DNA binding
GO:0043565
IDA
Genome Projectsequence-specific DNA binding
GO:0046983
IEA
Genome Projectprotein dimerization activity
GO:0070888
IDA
ISO
IEA
Genome ProjectE-box binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISO
IEA
Genome Projectnucleus
GO:0005654
ISO
TAS, IEA
Genome Projectnucleoplasm
GO:0005667
IDA
ISO
IEA
Genome Projecttranscription factor complex
GO:0005694
ISO
IEA
Genome Projectchromosome
GO:0005737
IDA
IEA
Genome Projectcytoplasm
GO:0005829
TAS
Genome Projectcytosol
GO:0033391
IDA
Genome Projectchromatoid body
GO:0043231
ISO
IEA
Genome Projectintracellular membrane-bounded organelle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000014PAS domain
IPR001067Nuclear translocator
IPR001610PAC motif
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767PAS fold

No MapMan annotations defined for this gene.