Gene: ENSMUSG00000026043 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000026043
Transcript Identifier
ENSMUST00000087883
Gene Type
Coding gene
Location
1 : 45311748-45348747 : positive

Family Information

Homologous gene family
HOM03P000086
(312 genes in 10 species)
specific family
Orthologous gene family
ORTHO03P008835
(9 genes in 2 species)
specific family
Duplication type
Tandem duplicate

Descriptions

gene_descr
collagen, type III, alpha 1

Identifiers

Type Value
UniprotP08121
UniprotQ3TVI5
MGI88453

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001501
IEA
Genome Projectskeletal system development
GO:0001568
IMP
Genome Projectblood vessel development
GO:0007160
ISO
IEA
Genome Projectcell-matrix adhesion
GO:0007179
ISO
IEA
Genome Projecttransforming growth factor beta receptor signaling pathway
GO:0007229
ISO
IEA
Genome Projectintegrin-mediated signaling pathway
GO:0007507
ISO
IEA
Genome Projectheart development
GO:0007568
IEA
Genome Projectaging
GO:0009314
ISO
IEA
Genome Projectresponse to radiation
GO:0009612
IEA
Genome Projectresponse to mechanical stimulus
GO:0018149
ISO
IEA
Genome Projectpeptide cross-linking
GO:0021987
IMP
Genome Projectcerebral cortex development
GO:0030199
IMP
ISO
Genome Projectcollagen fibril organization
GO:0034097
ISO
IEA
Genome Projectresponse to cytokine
GO:0035025
IDA
Genome Projectpositive regulation of Rho protein signal transduction
GO:0042060
ISO
IEA
Genome Projectwound healing
GO:0043206
ISO
IEA
Genome Projectextracellular fibril organization
GO:0043588
ISO
IEA
Genome Projectskin development
GO:0048565
IMP
Genome Projectdigestive tract development
GO:0050777
ISO
IEA
Genome Projectnegative regulation of immune response
GO:0060414
IMP
Genome Projectaorta smooth muscle tissue morphogenesis
GO:0071230
IDA
Genome Projectcellular response to amino acid stimulus
GO:2001223
IMP
Genome Projectnegative regulation of neuron migration

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005178
ISO
Genome Projectintegrin binding
GO:0005201
ISO
IEA
Genome Projectextracellular matrix structural constituent
GO:0046332
IPI
Genome ProjectSMAD binding
GO:0046872
IEA
Genome Projectmetal ion binding
GO:0048407
ISO
IEA
Genome Projectplatelet-derived growth factor binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
Genome Projectextracellular region
GO:0005578
IDA
IEA
Genome Projectproteinaceous extracellular matrix
GO:0005581
IDA
IEA
Genome Projectcollagen trimer
GO:0005586
IDA
ISO
Genome Projectcollagen type III trimer
GO:0005615
ISO
IEA
Genome Projectextracellular space
GO:0031012
IDA
ISO
IEA
Genome Projectextracellular matrix

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000885Fibrillar collagen, C-terminal
IPR001007VWFC domain
IPR008160Collagen triple helix repeat

No MapMan annotations defined for this gene.