Gene: ENSMUSG00000025332 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000025332
Transcript Identifier
ENSMUST00000112584
Gene Type
Coding gene
Location
X : 152233561-152273074 : positive

Family Information

Homologous gene family
HOM03P000217
(163 genes in 39 species)
specific family
Orthologous gene family
ORTHO03P003205
(25 genes in 17 species)
specific family

Descriptions

gene_descr
lysine (K)-specific demethylase 5C

Identifiers

Type Value
UniprotP41230
MGI99781

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000122
ISO
Genome Projectnegative regulation of transcription from RNA polymerase II promoter
GO:0006351
IEA
Genome Projecttranscription, DNA-templated
GO:0006355
IEA
Genome Projectregulation of transcription, DNA-templated
GO:0016568
IEA
Genome Projectchromatin modification
GO:0034720
ISO
IEA
Genome Projecthistone H3-K4 demethylation
GO:0042752
NAS
Genome Projectregulation of circadian rhythm
GO:0045892
IDA
Genome Projectnegative regulation of transcription, DNA-templated
GO:0048511
IEA
Genome Projectrhythmic process
GO:0055114
IEA
Genome Projectoxidation-reduction process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001085
ISO
Genome ProjectRNA polymerase II transcription factor binding
GO:0003677
IEA
Genome ProjectDNA binding
GO:0008270
IEA
Genome Projectzinc ion binding
GO:0016491
IEA
Genome Projectoxidoreductase activity
GO:0016706
IEA
Genome Projectoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0032453
ISO
IEA
Genome Projecthistone demethylase activity (H3-K4 specific)
GO:0042802
ISO
Genome Projectidentical protein binding
GO:0046872
IEA
Genome Projectmetal ion binding
GO:0051213
IEA
Genome Projectdioxygenase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
IEA
Genome Projectnucleus
GO:0005737
ISO
Genome Projectcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001606ARID DNA-binding domain
IPR001965Zinc finger, PHD-type
IPR003347JmjC domain
IPR003349JmjN domain
IPR004198Zinc finger, C5HC2-type
IPR011011Zinc finger, FYVE/PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR013637Lysine-specific demethylase-like domain
IPR019786Zinc finger, PHD-type, conserved site
IPR019787Zinc finger, PHD-finger

No MapMan annotations defined for this gene.