Gene: ENSMUSG00000020018 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000020018
Transcript Identifier
ENSMUST00000020203
Gene Type
Coding gene
Location
10 : 93583464-93589541 : negative

Family Information

Homologous gene family
HOM03P000635
(83 genes in 37 species)
specific family
Orthologous gene family
ORTHO03P000784
(43 genes in 38 species)
specific family

Descriptions

gene_descr
small nuclear ribonucleoprotein polypeptide F

Identifiers

Type Value
UniprotP62307
UniprotQ497K3
MGI1917128

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
ISS, ISO
IEA
Genome Projectspliceosomal snRNP assembly
GO:0000398
IBA
IEA
Genome ProjectmRNA splicing, via spliceosome
GO:0006397
IEA
Genome ProjectmRNA processing
GO:0008380
ISO
IEA
Genome ProjectRNA splicing
GO:0098779
ISO
Genome Projectmitophagy in response to mitochondrial depolarization
GO:1903146
IEA
Genome Projectregulation of mitophagy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISO, IBA
IEA
Genome ProjectRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
Genome Projectnucleus
GO:0005681
ISO
IEA
Genome Projectspliceosomal complex
GO:0005683
ISS, ISO
IEA
Genome ProjectU7 snRNP
GO:0005685
ISS, ISO, IBA
IEA
Genome ProjectU1 snRNP
GO:0005687
ISS, ISO
IEA
Genome ProjectU4 snRNP
GO:0005689
ISO
IEA
Genome ProjectU12-type spliceosomal complex
GO:0005732
IEA
Genome Projectsmall nucleolar ribonucleoprotein complex
GO:0005737
IEA
Genome Projectcytoplasm
GO:0005829
ISS, ISO
IEA
Genome Projectcytosol
GO:0030529
IEA
Genome Projectintracellular ribonucleoprotein complex
GO:0030532
ISO
IEA
Genome Projectsmall nuclear ribonucleoprotein complex
GO:0034709
ISS, ISO
IEA
Genome Projectmethylosome
GO:0034715
ISS, ISO
IEA
Genome ProjectpICln-Sm protein complex
GO:0034719
ISS, ISO
IEA
Genome ProjectSMN-Sm protein complex
GO:0071013
ISO, IBA
IEA
Genome Projectcatalytic step 2 spliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001163LSM domain, eukaryotic/archaea-type
IPR010920LSM domain
IPR016487Sm-like protein Lsm6/SmF

No MapMan annotations defined for this gene.