Gene: ENSMUSG00000002477 (Mus musculus)

Overview top

Gene Identifier
ENSMUSG00000002477
Transcript Identifier
ENSMUST00000002551
Gene Type
Coding gene
Location
18 : 10617913-10627870 : positive

Family Information

Homologous gene family
HOM03P001661
(47 genes in 36 species)
specific family

Descriptions

gene_descr
small nuclear ribonucleoprotein D1

Identifiers

Type Value
UniprotP62315
MGI98344

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000245
IBA
Genome Projectspliceosomal complex assembly
GO:0000387
ISS, ISO, IBA
IEA
Genome Projectspliceosomal snRNP assembly
GO:0002230
ISO
Genome Projectpositive regulation of defense response to virus by host
GO:0006396
IEA
Genome ProjectRNA processing
GO:0006397
IEA
Genome ProjectmRNA processing
GO:0008380
IEA
Genome ProjectRNA splicing
GO:0098779
ISO
Genome Projectmitophagy in response to mitochondrial depolarization
GO:1903146
IEA
Genome Projectregulation of mitophagy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
Genome ProjectRNA binding
GO:0044822
ISO
IEA
Genome Projectpoly(A) RNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000243
IBA
Genome Projectcommitment complex
GO:0005634
IDA
ISO
IEA
Genome Projectnucleus
GO:0005681
IEA
Genome Projectspliceosomal complex
GO:0005682
IBA
Genome ProjectU5 snRNP
GO:0005685
ISS, ISO, IBA
IEA
Genome ProjectU1 snRNP
GO:0005686
IBA
Genome ProjectU2 snRNP
GO:0005687
ISS, ISO, IBA
IEA
Genome ProjectU4 snRNP
GO:0005689
ISO, IBA
IEA
Genome ProjectU12-type spliceosomal complex
GO:0005737
IDA
IEA
Genome Projectcytoplasm
GO:0005829
ISS, ISO
IEA
Genome Projectcytosol
GO:0030529
IEA
Genome Projectintracellular ribonucleoprotein complex
GO:0034709
ISS, ISO
IEA
Genome Projectmethylosome
GO:0034715
ISS, ISO, IBA
IEA
Genome ProjectpICln-Sm protein complex
GO:0034719
ISS, ISO, IBA
IEA
Genome ProjectSMN-Sm protein complex
GO:0071010
IBA
Genome Projectprespliceosome
GO:0071011
IBA
Genome Projectprecatalytic spliceosome
GO:0071013
ISO, IBA
IEA
Genome Projectcatalytic step 2 spliceosome
GO:0097526
IBA
Genome Projectspliceosomal tri-snRNP complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001163LSM domain, eukaryotic/archaea-type
IPR010920LSM domain
IPR027141Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3

No MapMan annotations defined for this gene.