Gene: AT5G42080 (Arabidopsis thaliana)

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Gene Identifier
AT5G42080
Transcript Identifier
AT5G42080.1
Gene Type
Coding gene
Location
5 : 16820661-16824536 : negative

Family Information

Homologous gene family
HOM03P000185
(176 genes in 39 species)
specific family
Orthologous gene family
ORTHO03P002401
(30 genes in 15 species)
specific family

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000911
IGI
Gene Ontologycytokinesis by cell plate formation1 2
GO:0009793
IGI
Gene Ontologyembryo development ending in seed dormancy1 2
GO:0009920
IGI
Gene Ontologycell plate formation involved in plant-type cell wall biogenesis1 2
GO:0010091
IMP
Gene Ontologytrichome branching1 2
GO:0010051
IMP
Gene Ontologyxylem and phloem pattern formation3 4
GO:0072583
IDA
Gene Ontologyclathrin-mediated endocytosis5 6
GO:0032880
RCA
Gene Ontologyregulation of protein localization7 8

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
ISS
Gene OntologyGTP binding9
GO:0003924
IDA
Gene OntologyGTPase activity3 4
GO:0005515
IPI
Gene Ontologyprotein binding3 4 5 6 10 11
GO:0043424
IPI
Gene Ontologyprotein histidine kinase binding10 11
GO:0030276
IDA
Gene Ontologyclathrin binding5 6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm12
GO:0009504
IDA
Gene Ontologycell plate1 2
GO:0005773
IDA
Gene Ontologyvacuole13 14
GO:0005874
IDA
Gene Ontologymicrotubule3 4
GO:0005886
IDA
Gene Ontologyplasma membrane5 6 15 16 17 18 19 20
GO:0005774
IDA
Gene Ontologyvacuolar membrane21 22
GO:0005829
IDA
Gene Ontologycytosol23 24
GO:0009506
IDA
Gene Ontologyplasmodesma25 26
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane27 28

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000375Dynamin central domain
IPR001401Dynamin, GTPase domain
IPR003130Dynamin GTPase effector
IPR019762Dynamin, GTPase region, conserved site
IPR020850GTPase effector domain
IPR022812Dynamin superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR030381Dynamin-type guanine nucleotide-binding (G) domain

No MapMan annotations defined for this gene.