Gene: AT4G37930 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G37930
Transcript Identifier
AT4G37930.1
Gene Type
Coding gene
Location
4 : 17831891-17834742 : negative

Family Information

Homologous gene family
HOM03P000300
(134 genes in 39 species)
specific family
Orthologous gene family
ORTHO03P000052
(115 genes in 39 species)
specific family

Descriptions

Identifiers

Type Value

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006544
IDA
ISS
Gene Ontologyglycine metabolic process1 2 3
GO:0006563
IDA
ISS
Gene OntologyL-serine metabolic process1 2 3
GO:0019464
IMP
Gene Ontologyglycine decarboxylation via glycine cleavage system4
GO:0007623
IEP
Gene Ontologycircadian rhythm5 6
GO:0009416
IEP
Gene Ontologyresponse to light stimulus5 6
GO:0009626
TAS
Gene Ontologyplant-type hypersensitive response7 8
GO:0009853
IMP
Gene Ontologyphotorespiration9 10 11 12
GO:0046686
IEP
Gene Ontologyresponse to cadmium ion13 14
GO:0009409
IEP
RCA
Gene Ontologyresponse to cold15 16 17 18
GO:0009697
RCA
Gene Ontologysalicylic acid biosynthetic process17 18
GO:0009814
RCA
Gene Ontologydefense response, incompatible interaction17 18
GO:0019684
RCA
Gene Ontologyphotosynthesis, light reaction17 18
GO:0042742
RCA
Gene Ontologydefense response to bacterium17 18

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004372
IDA
ISS
TAS
Gene Ontologyglycine hydroxymethyltransferase activity1 2 3 19 20
GO:0008266
IDA
Gene Ontologypoly(U) RNA binding21 22
GO:0005515
IPI
Gene Ontologyprotein binding23 24 25 26

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
ISM
Gene Ontologymitochondrion23 24 25 26 27 28 29 30 31
GO:0005759
ISS
Gene Ontologymitochondrial matrix5 6
GO:0005634
IDA
Gene Ontologynucleus32 33
GO:0009507
IDA
Gene Ontologychloroplast34 35
GO:0022626
IDA
Gene Ontologycytosolic ribosome36 37
GO:0010319
IDA
Gene Ontologystromule15 16
GO:0005886
IDA
Gene Ontologyplasma membrane38 39
GO:0016020
IDA
Gene Ontologymembrane40 41
GO:0048046
IDA
Gene Ontologyapoplast42 43
GO:0009534
IDA
Gene Ontologychloroplast thylakoid44 45
GO:0009570
IDA
Gene Ontologychloroplast stroma44 45
GO:0005829
IDA
Gene Ontologycytosol25 26

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001085Serine hydroxymethyltransferase
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424Pyridoxal phosphate-dependent transferase
IPR019798Serine hydroxymethyltransferase, pyridoxal phosphate binding site

No MapMan annotations defined for this gene.