Gene: AT4G15560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G15560
Transcript Identifier
AT4G15560.1
Gene Type
Coding gene
Location
4 : 8884218-8887254 : positive

Family Information

Homologous gene family
HOM03P001228
(55 genes in 29 species)
specific family
Orthologous gene family
ORTHO03P001132
(40 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Identifiers

Type Value

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015995
IMP
RCA
Gene Ontologychlorophyll biosynthetic process1 2 3 4
GO:0019288
RCA
TAS
Gene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3 4 5 6
GO:0000096
RCA
Gene Ontologysulfur amino acid metabolic process3 4
GO:0006546
RCA
Gene Ontologyglycine catabolic process3 4
GO:0006636
RCA
Gene Ontologyunsaturated fatty acid biosynthetic process3 4
GO:0006655
RCA
Gene Ontologyphosphatidylglycerol biosynthetic process3 4
GO:0006733
RCA
Gene Ontologyoxidoreduction coenzyme metabolic process3 4
GO:0006766
RCA
Gene Ontologyvitamin metabolic process3 4
GO:0008652
RCA
Gene Ontologycellular amino acid biosynthetic process3 4
GO:0009072
RCA
Gene Ontologyaromatic amino acid family metabolic process3 4
GO:0009073
RCA
Gene Ontologyaromatic amino acid family biosynthetic process3 4
GO:0009106
RCA
Gene Ontologylipoate metabolic process3 4
GO:0009108
RCA
Gene Ontologycoenzyme biosynthetic process3 4
GO:0009117
RCA
Gene Ontologynucleotide metabolic process3 4
GO:0009416
RCA
Gene Ontologyresponse to light stimulus3 4
GO:0009695
RCA
Gene Ontologyjasmonic acid biosynthetic process3 4
GO:0009965
RCA
Gene Ontologyleaf morphogenesis3 4
GO:0010155
RCA
Gene Ontologyregulation of proton transport3 4
GO:0015994
RCA
Gene Ontologychlorophyll metabolic process3 4
GO:0016117
RCA
Gene Ontologycarotenoid biosynthetic process3 4
GO:0019216
RCA
Gene Ontologyregulation of lipid metabolic process3 4
GO:0019344
RCA
Gene Ontologycysteine biosynthetic process3 4
GO:0019748
RCA
Gene Ontologysecondary metabolic process3 4
GO:0030154
RCA
Gene Ontologycell differentiation3 4
GO:0031408
RCA
Gene Ontologyoxylipin biosynthetic process3 4
GO:0032880
RCA
Gene Ontologyregulation of protein localization3 4
GO:0044272
RCA
Gene Ontologysulfur compound biosynthetic process3 4
GO:0045893
RCA
Gene Ontologypositive regulation of transcription, DNA-templated3 4
GO:0046777
RCA
Gene Ontologyprotein autophosphorylation3 4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008661
IDA
Gene Ontology1-deoxy-D-xylulose-5-phosphate synthase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
ISM
Gene Ontologychloroplast7 8 9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005474Transketolase, N-terminal
IPR005475Transketolase-like, pyrimidine-binding domain
IPR005477Deoxyxylulose-5-phosphate synthase
IPR009014Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR020826Transketolase binding site
IPR029061Thiamin diphosphate-binding fold

No MapMan annotations defined for this gene.