Gene: AT3G56940 (Arabidopsis thaliana)

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Gene Identifier
AT3G56940
Transcript Identifier
AT3G56940.1
Gene Type
Coding gene
Location
3 : 21076594-21078269 : positive

Family Information

Homologous gene family
HOM03P003383
(29 genes in 23 species)
specific family

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
RCA
Gene OntologyrRNA processing1 2
GO:0006636
RCA
Gene Ontologyunsaturated fatty acid biosynthetic process1 2
GO:0009416
RCA
Gene Ontologyresponse to light stimulus1 2
GO:0009657
RCA
Gene Ontologyplastid organization1 2
GO:0010027
RCA
Gene Ontologythylakoid membrane organization1 2
GO:0010207
RCA
Gene Ontologyphotosystem II assembly1 2
GO:0015994
RCA
Gene Ontologychlorophyll metabolic process1 2
GO:0019216
RCA
Gene Ontologyregulation of lipid metabolic process1 2
GO:0019288
RCA
Gene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1 2
GO:0019344
RCA
Gene Ontologycysteine biosynthetic process1 2
GO:0031408
RCA
Gene Ontologyoxylipin biosynthetic process1 2
GO:0009658
IMP
Gene Ontologychloroplast organization3 4
GO:0015995
IMP
Gene Ontologychlorophyll biosynthetic process3 4
GO:1901401
IMP
Gene Ontologyregulation of tetrapyrrole metabolic process3 4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
TAS
Gene OntologyDNA binding5 6
GO:0048529
IMP
NAS
Gene Ontologymagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity7 8 9 10

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
ISM
Gene Ontologychloroplast11 12 13 14 15
GO:0009941
IDA
Gene Ontologychloroplast envelope16 17 18 19
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane7 8 20 21
GO:0009706
IDA
Gene Ontologychloroplast inner membrane7 8
GO:0009534
IDA
Gene Ontologychloroplast thylakoid18 19

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003251Rubrerythrin
IPR008434Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
IPR009078Ferritin-like superfamily

No MapMan annotations defined for this gene.