Gene: AT2G21660 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G21660
Transcript Identifier
AT2G21660.1
Gene Type
Coding gene
Location
2 : 9265477-9266316 : negative

Family Information

Homologous gene family
HOM03P000021
(957 genes in 39 species)
specific family
Orthologous gene family
ORTHO03P015098
(6 genes in 4 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
IGI, IEP
Gene Ontologyresponse to cold1 2 3 4
GO:0009414
IEP
Gene Ontologyresponse to water deprivation1 2
GO:0009651
IEP
RCA
Gene Ontologyresponse to salt stress1 2 5 6 7 8
GO:0046686
IEP
RCA
Gene Ontologyresponse to cadmium ion7 8 9 10
GO:0010501
IDA
Gene OntologyRNA secondary structure unwinding3 4
GO:0032508
IDA
Gene OntologyDNA duplex unwinding3 4
GO:0045087
IDA, IMP
Gene Ontologyinnate immune response11 12 13 14
GO:0006406
IMP
Gene OntologymRNA export from nucleus15 16
GO:0006970
IMP
Gene Ontologyresponse to osmotic stress15 16
GO:0010119
IMP
Gene Ontologyregulation of stomatal movement15 16
GO:0010228
IMP
RCA
Gene Ontologyvegetative to reproductive phase transition of meristem7 8 11 12
GO:0010043
IEP
Gene Ontologyresponse to zinc ion17 18
GO:0006094
RCA
Gene Ontologygluconeogenesis7 8
GO:0006096
RCA
Gene Ontologyglycolytic process7 8
GO:0006833
RCA
Gene Ontologywater transport7 8
GO:0006972
RCA
Gene Ontologyhyperosmotic response7 8
GO:0007030
RCA
Gene OntologyGolgi organization7 8
GO:0007623
IEP
RCA
TAS
Gene Ontologycircadian rhythm7 8 19 20
GO:0009266
RCA
Gene Ontologyresponse to temperature stimulus7 8
GO:0000380
IMP
Gene Ontologyalternative mRNA splicing, via spliceosome21 22

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IDA
ISS
Gene OntologyRNA binding1 2 3 4 23 24 25
GO:0003690
IDA
Gene Ontologydouble-stranded DNA binding1 2
GO:0003697
IDA
Gene Ontologysingle-stranded DNA binding1 2
GO:0003729
IDA
Gene OntologymRNA binding21 22

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion26
GO:0005634
IDA
ISS
Gene Ontologynucleus15 16 19 20 27 28
GO:0005737
IDA
Gene Ontologycytoplasm15 16 27 28
GO:0005777
IDA
Gene Ontologyperoxisome29 30
GO:0009507
IDA
Gene Ontologychloroplast31 32
GO:0005829
IDA
Gene Ontologycytosol33 34
GO:0009506
IDA
Gene Ontologyplasmodesma35 36
GO:0048046
IDA
Gene Ontologyapoplast37 38

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR012677Nucleotide-binding alpha-beta plait domain

No MapMan annotations defined for this gene.