Gene: AT1G55350 (Arabidopsis thaliana)

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Gene Identifier
AT1G55350
Transcript Identifier
AT1G55350.5
Gene Type
Coding gene
Location
1 : 20654463-20664501 : negative

Family Information

Homologous gene family
HOM03P000288
(137 genes in 25 species)
specific family
Orthologous gene family
ORTHO03P003966
(21 genes in 8 species)
specific family

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
IMP
RCA
NAS
Gene Ontologyembryo development ending in seed dormancy1 2 3 4 5 6 7
GO:0001708
IMP
Gene Ontologycell fate specification2 3
GO:0009960
IMP
Gene Ontologyendosperm development2 3
GO:0040014
IMP
Gene Ontologyregulation of multicellular organism growth4 5
GO:0007062
RCA
Gene Ontologysister chromatid cohesion6 7
GO:0007155
RCA
Gene Ontologycell adhesion6 7
GO:0009880
RCA
Gene Ontologyembryonic pattern specification6 7
GO:0010072
RCA
Gene Ontologyprimary shoot apical meristem specification6 7
GO:0010090
RCA
Gene Ontologytrichome morphogenesis6 7
GO:0010228
RCA
Gene Ontologyvegetative to reproductive phase transition of meristem6 7
GO:0010431
RCA
Gene Ontologyseed maturation6 7
GO:0045010
RCA
Gene Ontologyactin nucleation6 7
GO:0045595
RCA
Gene Ontologyregulation of cell differentiation6 7
GO:0048765
RCA
Gene Ontologyroot hair cell differentiation6 7
GO:0051301
RCA
Gene Ontologycell division6 7
GO:0071555
RCA
Gene Ontologycell wall organization6 7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004197
IDA
Gene Ontologycysteine-type endopeptidase activity4 5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
Gene Ontologyplasma membrane4 5 8 9 10 11 12 13
GO:0005737
IDA
Gene Ontologycytoplasm4 5
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum4 5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000169Cysteine peptidase, cysteine active site
IPR001300Peptidase C2, calpain, catalytic domain
IPR013320Concanavalin A-like lectin/glucanase domain
IPR022682Peptidase C2, calpain, large subunit, domain III
IPR022683Peptidase C2, calpain, domain III
IPR022684Peptidase C2, calpain family

No MapMan annotations defined for this gene.