Gene: AT1G53500 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G53500
Transcript Identifier
AT1G53500.1
Gene Type
Coding gene
Location
1 : 19967157-19969239 : negative

Family Information

Homologous gene family
HOM03P000421
(107 genes in 35 species)
specific family
Orthologous gene family
ORTHO03P000244
(59 genes in 35 species)
specific family
Duplication type
Block duplicate

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
ISS
Gene Ontologymetabolic process1
GO:0010192
IMP
Gene Ontologymucilage biosynthetic process2 3
GO:0010214
IMP
Gene Ontologyseed coat development4 5
GO:0010253
IDA
Gene OntologyUDP-rhamnose biosynthetic process6 7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
ISS
Gene Ontologycatalytic activity1
GO:0010280
IDA
ISS
Gene OntologyUDP-L-rhamnose synthase activity6 7 8 9
GO:0010489
TAS
Gene OntologyUDP-4-keto-6-deoxy-glucose-3,5-epimerase activity6 7
GO:0010490
TAS
Gene OntologyUDP-4-keto-rhamnose-4-keto-reductase activity6 7
GO:0050377
IDA
Gene OntologyUDP-glucose 4,6-dehydratase activity6 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
Gene Ontologycytosol10 11

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005888dTDP-glucose 4,6-dehydratase
IPR016040NAD(P)-binding domain
IPR029903RmlD-like substrate binding domain

No MapMan annotations defined for this gene.