Gene: AT1G06680 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G06680
Transcript Identifier
AT1G06680.1
Gene Type
Coding gene
Location
1 : 2047940-2049186 : positive

Family Information

Homologous gene family
HOM03P003715
(26 genes in 18 species)
specific family
Duplication type
Block duplicate

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
IEP
RCA
Gene Ontologydefense response to bacterium1 2 3 4
GO:0000165
RCA
Gene OntologyMAPK cascade3 4
GO:0006364
RCA
Gene OntologyrRNA processing3 4
GO:0006612
RCA
Gene Ontologyprotein targeting to membrane3 4
GO:0009409
RCA
Gene Ontologyresponse to cold3 4
GO:0009595
RCA
Gene Ontologydetection of biotic stimulus3 4
GO:0009637
RCA
Gene Ontologyresponse to blue light3 4
GO:0009644
RCA
Gene Ontologyresponse to high light intensity3 4
GO:0009657
RCA
Gene Ontologyplastid organization3 4
GO:0009697
RCA
Gene Ontologysalicylic acid biosynthetic process3 4
GO:0009744
RCA
Gene Ontologyresponse to sucrose3 4
GO:0009773
RCA
Gene Ontologyphotosynthetic electron transport in photosystem I3 4
GO:0009814
RCA
Gene Ontologydefense response, incompatible interaction3 4
GO:0009862
RCA
Gene Ontologysystemic acquired resistance, salicylic acid mediated signaling pathway3 4
GO:0009867
RCA
Gene Ontologyjasmonic acid mediated signaling pathway3 4
GO:0010114
RCA
Gene Ontologyresponse to red light3 4
GO:0010155
RCA
Gene Ontologyregulation of proton transport3 4
GO:0010200
RCA
Gene Ontologyresponse to chitin3 4
GO:0010207
RCA
Gene Ontologyphotosystem II assembly3 4
GO:0010218
RCA
Gene Ontologyresponse to far red light3 4
GO:0010310
RCA
Gene Ontologyregulation of hydrogen peroxide metabolic process3 4
GO:0010363
RCA
Gene Ontologyregulation of plant-type hypersensitive response3 4
GO:0019344
RCA
Gene Ontologycysteine biosynthetic process3 4
GO:0019684
RCA
TAS
Gene Ontologyphotosynthesis, light reaction3 4 5 6
GO:0031348
RCA
Gene Ontologynegative regulation of defense response3 4
GO:0043900
RCA
Gene Ontologyregulation of multi-organism process3 4
GO:0050832
RCA
Gene Ontologydefense response to fungus3 4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008266
IDA
Gene Ontologypoly(U) RNA binding7 8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
ISM
Gene Ontologychloroplast9 10 11 12 13
GO:0009543
IDA
ISS
Gene Ontologychloroplast thylakoid lumen14 15 16
GO:0009654
ISS
Gene Ontologyphotosystem II oxygen evolving complex14
GO:0030095
ISS
Gene Ontologychloroplast photosystem II14
GO:0009534
IDA
Gene Ontologychloroplast thylakoid17 18 19 20
GO:0019898
TAS
Gene Ontologyextrinsic component of membrane21 22
GO:0031977
IDA
Gene Ontologythylakoid lumen21 22
GO:0009579
IDA
Gene Ontologythylakoid15 16 23 24 25 26 27 28
GO:0009941
IDA
Gene Ontologychloroplast envelope29 30
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane23 24 31 32
GO:0009570
IDA
Gene Ontologychloroplast stroma27 28 33 34
GO:0048046
IDA
Gene Ontologyapoplast35 36

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002683PsbP family
IPR016123Mog1/PsbP, alpha/beta/alpha sandwich

No MapMan annotations defined for this gene.