Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ccr175760	Chondrus crispus	0.0	1320	641	100.00
CM16G00880	Cyanidioschyzon merolae	0.0	540	577	50.09
ES0003G00250	Ectocarpus siliculosus	5e-151	457	615	42.11
AA0010G01840	Aureococcus anophagefferens	3e-136	417	577	43.50
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	6e-133	412	631	39.78
emh310600	Emiliania huxleyi	1e-131	407	569	41.48
CV00G70600	Coccomyxa subellipsoidea C-169	5e-131	405	582	40.89
PTI_02G04580	Phaeodactylum tricornutum	9e-130	402	595	40.34
FC007G06160	Fragilariopsis cylindrus	1e-128	398	556	40.65
CR12G06760	Chlamydomonas reinhardtii	1e-128	399	566	41.34
VC00G100730	Volvox carteri	3e-124	388	592	39.53
Naga_100099g13	Nannochloropsis gaditana	2e-119	391	573	41.88
PI00G68540	Picochlorum sp. SENEW3 (SE3)	9e-119	374	560	38.75
RCC4223.04g05780	Picochlorum_RCC4223	1e-117	372	566	39.22
CNC64A_037G00370	Chlorella sp NC64A	3e-114	361	567	38.98
emh197990	Emiliania huxleyi	2e-112	358	612	38.07
emh706340	Emiliania huxleyi	2e-112	358	612	38.07
phs197510	Phytophtora sojae	1e-107	343	570	36.84
phs198830	Phytophtora sojae	6e-107	342	562	38.08
WBGene00007917	Caenorhabditis elegans	2e-103	333	565	36.64
phs198930	Phytophtora sojae	5e-101	328	570	35.96
ENSG00000016391	Homo sapiens	3e-97	317	574	35.37
gsu91210	Galdieria sulphuraria	1e-95	303	296	49.66
FBgn0030596	Drosophila melanogaster	2e-90	300	598	33.95
FBgn0030590	Drosophila melanogaster	3e-88	296	581	36.14
FBgn0030592	Drosophila melanogaster	1e-84	286	593	35.41
FBgn0030598	Drosophila melanogaster	2e-84	283	580	36.03
FBgn0030588	Drosophila melanogaster	2e-82	278	581	35.28
FBgn0266435	Drosophila melanogaster	4e-81	275	582	34.02
FBgn0001112	Drosophila melanogaster	1e-78	268	607	32.62
Naga_100004g95	Nannochloropsis gaditana	6e-78	267	611	32.57
FBgn0039415	Drosophila melanogaster	2e-75	259	588	32.14
FBgn0030589	Drosophila melanogaster	2e-75	259	594	34.01
FBgn0030587	Drosophila melanogaster	2e-71	248	591	31.47
emh610010	Emiliania huxleyi	2e-70	246	629	32.27
TP08G04640	Thalassiosira pseudonana	2e-68	239	535	33.64
gsu91190	Galdieria sulphuraria	6e-68	229	199	57.79
AA0058G00090	Aureococcus anophagefferens	8e-66	241	578	34.43
FBgn0030586	Drosophila melanogaster	9e-66	233	586	31.91
emh381540	Emiliania huxleyi	1e-62	224	621	31.40
FBgn0030593	Drosophila melanogaster	6e-59	214	583	30.70
FBgn0030594	Drosophila melanogaster	3e-53	198	596	27.68
Naga_100105g4	Nannochloropsis gaditana	2e-49	187	639	29.73
ES0089G00140	Ectocarpus siliculosus	4e-44	172	674	28.34
phs157680	Phytophtora sojae	1e-43	170	625	25.60
AA0005G05800	Aureococcus anophagefferens	1e-41	167	597	29.82
FC027G00320	Fragilariopsis cylindrus	5e-41	160	574	27.00
DDB_G0287229	Dictyostelium discoideum	3e-39	155	596	28.19
FBgn0037896	Drosophila melanogaster	1e-37	151	618	26.38
phs172930	Phytophtora sojae	2e-36	146	421	30.40
OS10G38050	Oryza sativa	1e-35	145	586	29.86
PTI_10G02300	Phaeodactylum tricornutum	1e-31	135	696	24.71
OS04G48400	Oryza sativa	1e-31	133	621	29.79
ATR_00036G00190	Amborella trichopoda	8e-31	131	614	27.20
FBgn0030597	Drosophila melanogaster	1e-30	131	594	29.12
ATR_00069G01340	Amborella trichopoda	1e-29	128	631	26.15
AT3G56060	Arabidopsis thaliana	3e-29	126	584	26.88
Naga_100040g2	Nannochloropsis gaditana	5e-29	124	486	29.01
OS02G45530	Oryza sativa	3e-28	124	592	27.53
OS09G19930	Oryza sativa	4e-28	123	596	26.51
ccr36220	Chondrus crispus	4e-28	123	598	25.75
FC014G01320	Fragilariopsis cylindrus	2e-27	122	611	24.71
OS03G02700	Oryza sativa	3e-27	120	599	27.88
AT5G51950	Arabidopsis thaliana	4e-27	120	575	26.61
PP00078G00400	Physcomitrella patens	2e-26	118	581	25.30
AT1G73050	Arabidopsis thaliana	9e-26	115	581	28.40
OS08G31030	Oryza sativa	1e-25	115	609	25.94
emh92500	Emiliania huxleyi	2e-25	112	380	28.68
AT1G12570	Arabidopsis thaliana	3e-25	114	598	24.92
Naga_100225g10	Nannochloropsis gaditana	4e-25	114	619	27.79
AT1G72970	Arabidopsis thaliana	1e-24	112	584	26.20
AT5G51930	Arabidopsis thaliana	3e-24	111	634	25.08
AA0005G05600	Aureococcus anophagefferens	1e-23	103	153	43.79
emh222900	Emiliania huxleyi	2e-23	108	387	28.42
PTI_02G04520	Phaeodactylum tricornutum	3e-23	108	343	26.82
ES0475G00020	Ectocarpus siliculosus	5e-22	104	359	28.13
AA0058G00110	Aureococcus anophagefferens	3e-21	99.0	282	29.79
emh92480	Emiliania huxleyi	6e-21	96.7	194	38.14
ATR_00025G03910	Amborella trichopoda	2e-20	99.8	322	32.61
AA0002G03300	Aureococcus anophagefferens	3e-20	100	624	27.08
PP00078G00390	Physcomitrella patens	2e-17	89.4	571	24.87
AT1G14185	Arabidopsis thaliana	2e-16	87.0	342	27.19
emh223740	Emiliania huxleyi	5e-16	82.4	206	33.50
AT1G14190	Arabidopsis thaliana	6e-16	84.7	329	27.66
PP00085G00680	Physcomitrella patens	8e-16	85.1	314	30.57
PP00003G02580	Physcomitrella patens	8e-16	85.1	604	25.66
phs36230	Phytophtora sojae	2e-14	80.9	340	27.94
emh751500	Emiliania huxleyi	2e-14	80.1	620	26.13
OS06G44540	Oryza sativa	7e-14	79.0	317	29.34
phs334210	Phytophtora sojae	2e-12	73.9	342	26.90
emh416920	Emiliania huxleyi	5e-12	72.4	191	32.98
ccr51120	Chondrus crispus	9e-12	72.0	393	24.94
phs192170	Phytophtora sojae	2e-11	71.2	573	24.43
PI00G66040	Picochlorum sp. SENEW3 (SE3)	3e-10	67.4	560	24.29
phs176300	Phytophtora sojae	2e-09	64.7	353	27.48
RCC4223.08g04290	Picochlorum_RCC4223	4e-09	63.9	341	23.75

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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