Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
WBGene00022752	Caenorhabditis elegans	1e-111	321	154	100.00
WBGene00021210	Caenorhabditis elegans	3e-23	96.3	129	41.09
gsu51700	Galdieria sulphuraria	4e-19	85.1	135	36.30
ccr178780	Chondrus crispus	3e-17	80.1	123	34.96
CR03G05450	Chlamydomonas reinhardtii	3e-13	69.3	71	42.25
OS03G01180	Oryza sativa	8e-13	67.4	139	31.65
emh44860	Emiliania huxleyi	1e-11	62.8	133	29.32
ccr39920	Chondrus crispus	2e-11	63.2	129	30.23
ATR_00111G00310	Amborella trichopoda	6e-11	62.8	154	34.42
VC00G04470	Volvox carteri	9e-11	61.6	66	40.91
TP02G07380	Thalassiosira pseudonana	1e-10	60.8	129	28.68
CM11G01730	Cyanidioschyzon merolae	2e-10	61.2	113	33.63
emh689730	Emiliania huxleyi	2e-10	61.2	133	29.32
pte783800	Paramecium tetraurelia	4e-10	59.3	98	37.76
pte369810	Paramecium tetraurelia	1e-09	57.8	129	31.01
AT3G60450	Arabidopsis thaliana	2e-09	58.2	109	31.19
ENSG00000160185	Homo sapiens	2e-09	59.3	160	28.75
AT3G60440	Arabidopsis thaliana	3e-09	58.2	156	26.92
AC00G14140	Asterochloris sp. Cgr-DA1pho v2.0	6e-09	57.0	118	33.90
CV00G01790	Coccomyxa subellipsoidea C-169	6e-09	57.4	100	29.00
AT3G60420	Arabidopsis thaliana	8e-09	57.0	77	36.36
pte623620	Paramecium tetraurelia	4e-08	53.5	102	39.22
DDB_G0267574	Dictyostelium discoideum	4e-08	53.9	129	28.68
CV00G07620	Coccomyxa subellipsoidea C-169	8e-08	53.5	91	34.07
WBGene00010082	Caenorhabditis elegans	9e-08	53.9	97	37.11
PP00042G01020	Physcomitrella patens	2e-07	52.4	77	40.26
PP00109G00860	Physcomitrella patens	3e-07	52.4	90	32.22
ATR_00149G00620	Amborella trichopoda	3e-07	51.2	74	32.43
pte594480	Paramecium tetraurelia	7e-07	50.8	103	30.10
CR12G07780	Chlamydomonas reinhardtii	8e-07	50.8	81	37.04
ATR_00111G00950	Amborella trichopoda	1e-06	50.1	71	35.21
ATR_00166G00270	Amborella trichopoda	2e-06	50.1	76	34.21
RCC4223.01g03680	Picochlorum_RCC4223	2e-06	49.3	82	31.71
VC00G101520	Volvox carteri	3e-06	49.3	80	36.25
HE0000G04730	Helicosporidium sp.	9e-06	47.8	77	36.36

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment