Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
VC00G87170	Volvox carteri	4e-111	319	155	100.00
CR10G05780	Chlamydomonas reinhardtii	7e-51	166	137	63.50
gsu13530	Galdieria sulphuraria	6e-28	105	111	43.24
ATR_00001G01640	Amborella trichopoda	2e-26	102	115	40.87
PP00081G00640	Physcomitrella patens	3e-26	103	110	43.64
gsu98730	Galdieria sulphuraria	3e-26	103	112	42.86
AT5G66040	Arabidopsis thaliana	3e-25	99.4	98	47.96
OS06G50930	Oryza sativa	8e-25	99.4	113	39.82
AT4G35770	Arabidopsis thaliana	9e-25	99.8	119	40.34
ES0080G00090	Ectocarpus siliculosus	2e-24	97.1	115	43.48
ccr141380	Chondrus crispus	8e-24	99.4	121	45.45
RCC4223.02g11355	Picochlorum_RCC4223	6e-23	94.7	106	49.06
PI00G38740	Picochlorum sp. SENEW3 (SE3)	1e-22	93.6	106	48.11
CNC64A_016G01400	Chlorella sp NC64A	3e-22	91.3	95	48.42
AC00G80510	Asterochloris sp. Cgr-DA1pho v2.0	9e-22	90.9	114	40.35
PP00001G00600	Physcomitrella patens	2e-20	89.4	111	38.74
OS02G01220	Oryza sativa	7e-20	85.5	107	38.32
HE0000G54400	Helicosporidium sp.	7e-19	81.6	84	47.62
BPRRCC1105_08G04060	Bathycoccus prasinos	1e-18	82.8	107	38.32
OS04G17660	Oryza sativa	3e-18	81.3	107	39.25
CNC64A_016G01410	Chlorella sp NC64A	6e-18	80.1	111	38.74
ATR_00018G01210	Amborella trichopoda	9e-18	81.6	98	40.82
AC00G71800	Asterochloris sp. Cgr-DA1pho v2.0	1e-17	81.3	141	34.04
CNC64A_016G01370	Chlorella sp NC64A	3e-17	77.8	118	36.44
AT2G21045	Arabidopsis thaliana	4e-17	78.6	95	42.11
AT2G17850	Arabidopsis thaliana	5e-17	78.2	106	39.62
CV00G82930	Coccomyxa subellipsoidea C-169	7e-17	77.0	101	36.63
VC00G43040	Volvox carteri	2e-16	77.4	123	38.21
CR13G02680	Chlamydomonas reinhardtii	4e-16	76.6	111	39.64
CM17G04660	Cyanidioschyzon merolae	5e-16	75.9	98	41.84
PP00083G00810	Physcomitrella patens	6e-16	76.3	151	33.77
CNC64A_011G02170	Chlorella sp NC64A	2e-14	71.6	115	39.13
AT5G66170	Arabidopsis thaliana	2e-14	70.9	122	36.89
AP00G06010	Auxenochlorella protothecoides	4e-14	68.9	109	36.70
AA0005G02070	Aureococcus anophagefferens	9e-14	67.8	93	35.48
AP00G25030	Auxenochlorella protothecoides	1e-13	69.3	147	31.97
CV00G89760	Coccomyxa subellipsoidea C-169	2e-13	68.9	115	35.65
CNC64A_006G01270	Chlorella sp NC64A	5e-13	68.2	131	35.11
OS02G06290	Oryza sativa	9e-13	66.6	92	36.96
AC00G64880	Asterochloris sp. Cgr-DA1pho v2.0	2e-12	66.2	111	35.14
MRCC299_04G02950	Micromonas sp RCC299	4e-12	65.5	137	31.39
CNC64A_018G00060	Chlorella sp NC64A	4e-12	67.8	105	41.90
MP12G02960	Micromonas pusilla strain CCMP1545	6e-12	64.7	123	30.08
PP00141G00050	Physcomitrella patens	1e-11	64.3	160	27.50
CV00G11240	Coccomyxa subellipsoidea C-169	4e-11	63.2	125	33.60
AT4G27700	Arabidopsis thaliana	8e-11	61.2	140	30.71
PI00G64980	Picochlorum sp. SENEW3 (SE3)	1e-10	61.2	111	35.14
AT2G42220	Arabidopsis thaliana	2e-10	60.8	154	29.87
CR13G07240	Chlamydomonas reinhardtii	2e-10	61.2	121	33.06
MP05G01980	Micromonas pusilla strain CCMP1545	4e-10	60.1	128	32.81
OL01G03720	Ostreococcus lucimarinus	4e-10	59.7	121	33.06
BPRRCC1105_03G00360	Bathycoccus prasinos	7e-10	58.9	130	28.46
OT_01G03470	Ostreococcus tauri	7e-10	59.3	119	31.93
RCC4223.02g10340	Picochlorum_RCC4223	7e-10	58.9	111	34.23
MP07G04340	Micromonas pusilla strain CCMP1545	9e-10	57.8	78	38.46
PTI_04G05660	Phaeodactylum tricornutum	9e-10	58.2	100	36.00
VC00G132430	Volvox carteri	1e-09	59.3	112	34.82
HE0000G46360	Helicosporidium sp.	1e-09	57.4	134	29.85
gsu40020	Galdieria sulphuraria	1e-09	57.0	112	29.46
PTI_19G01310	Phaeodactylum tricornutum	1e-09	56.6	112	32.14
OM_01G03260	Ostreococcus mediterraneus	2e-09	57.4	114	30.70
ATR_00027G00800	Amborella trichopoda	3e-09	57.0	139	29.50
OM_11G00770	Ostreococcus mediterraneus	3e-09	57.4	137	32.85
ORCC809_01G03060	Ostreococcus sp RCC809	4e-09	57.0	112	29.46
FBgn0039145	Drosophila melanogaster	9e-09	54.7	110	31.82
PP00245G00300	Physcomitrella patens	1e-08	55.8	124	28.23
OS09G36040	Oryza sativa	1e-08	55.5	138	29.71
RCC4223.02g04140	Picochlorum_RCC4223	2e-08	55.1	124	30.65
RCC4223.181g00030	Picochlorum_RCC4223	3e-08	52.8	96	34.38
FBgn0001228	Drosophila melanogaster	6e-08	52.0	90	32.22
MP01G09040	Micromonas pusilla strain CCMP1545	6e-08	53.9	56	46.43
PI00G21160	Picochlorum sp. SENEW3 (SE3)	9e-08	53.5	124	29.84
OS12G24020	Oryza sativa	1e-07	51.6	78	38.46
CR16G01830	Chlamydomonas reinhardtii	1e-07	52.8	152	28.29
BPRRCC1105_01G04480	Bathycoccus prasinos	1e-07	52.8	120	25.83
SPAC4H3.07c	Schizosaccharomyces pombe	2e-07	50.8	89	30.34
PTI_16G02020	Phaeodactylum tricornutum	2e-07	51.6	89	37.08
AT4G24750	Arabidopsis thaliana	3e-07	52.0	133	29.32
VC00G27330	Volvox carteri	6e-07	51.6	95	32.63
MRCC299_14G00300	Micromonas sp RCC299	7e-07	50.4	117	33.33
CR16G04640	Chlamydomonas reinhardtii	9e-07	50.8	104	31.73
CNC64A_016G00930	Chlorella sp NC64A	1e-06	50.1	131	27.48
PP00153G00290	Physcomitrella patens	1e-06	50.4	126	30.95
AT3G08920	Arabidopsis thaliana	1e-06	49.7	122	29.51
PP00014G01960	Physcomitrella patens	2e-06	50.1	137	27.01
ATR_00046G00020	Amborella trichopoda	2e-06	48.9	119	26.89
ENSMUSG00000103711	Mus musculus	2e-06	47.8	122	31.97
ENSMUSG00000028251	Mus musculus	2e-06	48.1	110	29.09
AA0038G00500	Aureococcus anophagefferens	3e-06	49.3	94	28.72
VC00G133230	Volvox carteri	4e-06	47.4	93	32.26
OS09G10750	Oryza sativa	4e-06	48.5	157	27.39
AP00G05940	Auxenochlorella protothecoides	4e-06	47.8	152	26.97
OM_12G01280	Ostreococcus mediterraneus	9e-06	45.8	81	35.80
VC00G78660	Volvox carteri	9e-06	48.1	155	27.10

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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