Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
VC00G68920	Volvox carteri	0.0	1197	584	100.00
CR06G04470	Chlamydomonas reinhardtii	0.0	833	651	66.51
PI00G51280	Picochlorum sp. SENEW3 (SE3)	5e-94	308	433	39.03
HE0000G41170	Helicosporidium sp.	8e-94	306	375	44.80
AP00G21430	Auxenochlorella protothecoides	2e-92	303	379	41.95
RCC4223.04g03450	Picochlorum_RCC4223	1e-91	302	441	38.55
CV00G12800	Coccomyxa subellipsoidea C-169	1e-87	289	444	38.74
BPRRCC1105_06G01240	Bathycoccus prasinos	1e-84	283	363	40.22
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	1e-81	272	436	38.07
MRCC299_10G04230	Micromonas sp RCC299	1e-81	271	367	38.42
OL16G00900	Ostreococcus lucimarinus	2e-81	271	442	37.33
CV00G12810	Coccomyxa subellipsoidea C-169	2e-80	266	393	39.69
OT_17G00830	Ostreococcus tauri	8e-80	267	368	38.59
AT3G07330	Arabidopsis thaliana	2e-77	265	361	39.89
MP16G01280	Micromonas pusilla strain CCMP1545	3e-77	259	366	38.80
ORCC809_16G01780	Ostreococcus sp RCC809	3e-77	261	410	38.29
OM_17G00960	Ostreococcus mediterraneus	2e-75	258	434	37.10
AT4G31590	Arabidopsis thaliana	2e-74	257	372	38.71
PP00224G00220	Physcomitrella patens	2e-74	257	364	39.01
PP00162G00740	Physcomitrella patens	5e-74	256	369	38.21
CNC64A_025G01180	Chlorella sp NC64A	7e-74	254	379	39.58
PP00019G01110	Physcomitrella patens	1e-73	255	370	38.11
PP00373G00150	Physcomitrella patens	2e-73	254	378	37.30
OS02G09930	Oryza sativa	2e-73	250	373	37.53
PP00065G00990	Physcomitrella patens	4e-73	249	375	37.07
AT5G22740	Arabidopsis thaliana	7e-73	249	385	36.88
AT2G35650	Arabidopsis thaliana	1e-72	249	415	34.46
OS02G51060	Oryza sativa	2e-72	248	434	34.79
OS03G07350	Oryza sativa	3e-72	248	445	32.81
PP00089G01080	Physcomitrella patens	3e-72	251	364	37.91
OS07G03260	Oryza sativa	4e-72	251	380	37.89
PP00015G00680	Physcomitrella patens	4e-72	250	372	37.90
ATR_00019G01680	Amborella trichopoda	5e-72	250	413	35.35
AT1G23480	Arabidopsis thaliana	1e-71	246	374	37.70
OS08G15420	Oryza sativa	1e-71	250	375	37.33
PP00036G00370	Physcomitrella patens	4e-71	244	372	36.56
AT5G03760	Arabidopsis thaliana	4e-71	244	377	37.14
OS09G25900	Oryza sativa	4e-71	248	376	37.77
PP00036G01070	Physcomitrella patens	7e-71	243	363	36.91
AT2G24630	Arabidopsis thaliana	9e-71	247	367	37.33
AT5G16190	Arabidopsis thaliana	1e-70	240	444	32.66
AT1G24070	Arabidopsis thaliana	2e-70	243	389	34.96
ATR_00040G02570	Amborella trichopoda	5e-70	241	290	42.07
OS03G56060	Oryza sativa	1e-69	238	364	36.81
ATR_00065G00270	Amborella trichopoda	1e-69	244	373	37.27
ATR_00013G02120	Amborella trichopoda	1e-69	243	394	38.07
OS06G42020	Oryza sativa	2e-69	239	395	36.20
OS07G43710	Oryza sativa	4e-69	240	390	35.13
AT3G28180	Arabidopsis thaliana	4e-69	242	391	36.83
AT4G07960	Arabidopsis thaliana	4e-69	242	382	36.65
PP00164G00010	Physcomitrella patens	7e-69	242	372	38.71
OS01G56130	Oryza sativa	1e-68	241	383	36.29
OS03G26044	Oryza sativa	2e-68	238	400	35.50
OS05G43530	Oryza sativa	7e-68	239	407	34.89
OS10G26630	Oryza sativa	1e-66	232	370	34.32
AT3G56000	Arabidopsis thaliana	2e-65	229	370	34.86
OS08G33740	Oryza sativa	7e-65	229	394	35.53
ATR_00072G01360	Amborella trichopoda	1e-64	221	257	42.41
AT4G13410	Arabidopsis thaliana	2e-64	226	371	34.77
OS06G12460	Oryza sativa	8e-60	215	440	32.27
AT4G16590	Arabidopsis thaliana	2e-55	198	393	33.84
emh181270	Emiliania huxleyi	2e-44	166	246	41.46
emh488170	Emiliania huxleyi	2e-44	166	246	41.46
OS09G26770	Oryza sativa	2e-36	145	328	31.40
OM_13G00450	Ostreococcus mediterraneus	5e-26	117	274	32.12
OL20G02910	Ostreococcus lucimarinus	1e-24	113	289	30.45
ORCC809_20G02860	Ostreococcus sp RCC809	1e-24	112	245	31.02
OT_14G02980	Ostreococcus tauri	5e-22	104	268	30.60
ES0200G00060	Ectocarpus siliculosus	4e-14	79.3	283	30.39
ES0097G00300	Ectocarpus siliculosus	3e-13	77.0	252	28.57
ES0185G00090	Ectocarpus siliculosus	3e-12	73.9	271	28.04
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	7e-12	72.4	257	26.85
ES0097G00210	Ectocarpus siliculosus	5e-11	70.1	250	27.60
emh647580	Emiliania huxleyi	8e-10	65.9	260	25.00
Naga_100049g27	Nannochloropsis gaditana	1e-09	65.1	285	22.81
ES0097G00120	Ectocarpus siliculosus	2e-08	61.6	198	30.81
PP00372G00370	Physcomitrella patens	2e-08	61.2	369	24.66
DDB_G0269124	Dictyostelium discoideum	1e-07	59.3	171	29.24
PI00G46760	Picochlorum sp. SENEW3 (SE3)	3e-07	57.8	247	24.70
RCC4223.10g01020	Picochlorum_RCC4223	8e-07	56.2	247	24.70
CV00G28250	Coccomyxa subellipsoidea C-169	6e-06	53.5	283	24.38
CV00G13860	Coccomyxa subellipsoidea C-169	9e-06	52.8	269	23.79

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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