Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
VC00G146720	Volvox carteri	0.0	3199	1563	100.00
CR03G09710	Chlamydomonas reinhardtii	0.0	1925	1603	69.43
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	774	699	58.08
CNC64A_005G01870	Chlorella sp NC64A	0.0	762	719	56.47
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	762	752	55.19
RCC4223.09g01180	Picochlorum_RCC4223	0.0	761	843	50.42
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	641	502	62.95
OS01G56980	Oryza sativa	0.0	643	687	52.26
OM_09G03190	Ostreococcus mediterraneus	0.0	623	719	48.26
MRCC299_04G04580	Micromonas sp RCC299	0.0	614	707	50.64
HE0000G10040	Helicosporidium sp.	0.0	582	468	65.38
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	596	713	47.55
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	597	711	48.66
OL03G03010	Ostreococcus lucimarinus	1e-180	577	711	46.13
FBgn0027279	Drosophila melanogaster	2e-161	542	666	46.70
OS03G48300	Oryza sativa	2e-158	516	505	54.46
ATR_00054G00710	Amborella trichopoda	6e-156	509	496	54.44
AT3G01310	Arabidopsis thaliana	2e-154	505	502	54.98
AT5G15070	Arabidopsis thaliana	7e-153	501	495	53.74
PP00112G00240	Physcomitrella patens	3e-152	499	486	54.32
PP00070G01260	Physcomitrella patens	6e-152	500	497	53.92
OT_03G03070	Ostreococcus tauri	8e-152	503	522	50.57
FC005G10040	Fragilariopsis cylindrus	1e-151	491	709	42.03
ENSG00000145725	Homo sapiens	3e-151	503	660	46.06
CR01G11320	Chlamydomonas reinhardtii	2e-145	501	326	69.33
TP02G08430	Thalassiosira pseudonana	5e-138	456	662	41.84
VC00G13030	Volvox carteri	5e-135	470	399	59.65
WBGene00018508	Caenorhabditis elegans	8e-125	429	504	46.83
phs362880	Phytophtora sojae	1e-122	419	538	45.17
ES0425G00030	Ectocarpus siliculosus	2e-122	424	680	39.41
emh565740	Emiliania huxleyi	4e-122	406	583	45.11
emh375850	Emiliania huxleyi	9e-122	405	583	44.94
emh483710	Emiliania huxleyi	1e-120	411	509	43.42
pte664940	Paramecium tetraurelia	6e-116	398	596	41.61
AA0014G02190	Aureococcus anophagefferens	9e-115	387	442	46.61
pte599340	Paramecium tetraurelia	3e-113	390	567	42.15
BPRRCC1105_09G03180	Bathycoccus prasinos	2e-108	383	527	45.16
SPCC1672.06c	Schizosaccharomyces pombe	3e-100	349	504	41.27
PTI_11G00860	Phaeodactylum tricornutum	2e-98	351	346	52.89
phs223530	Phytophtora sojae	7e-97	340	277	59.21
emh92080	Emiliania huxleyi	9e-91	317	309	52.43
CM09G02100	Cyanidioschyzon merolae	4e-87	294	309	49.19
emh739850	Emiliania huxleyi	5e-87	312	307	51.79
CM09G02370	Cyanidioschyzon merolae	8e-87	292	307	49.19
DDB_G0284617	Dictyostelium discoideum	1e-73	261	311	45.34
gsu105930	Galdieria sulphuraria	6e-70	247	358	37.99
ccr179200	Chondrus crispus	1e-55	202	288	42.01
AP00G16430	Auxenochlorella protothecoides	5e-52	202	259	49.03
HE0000G36530	Helicosporidium sp.	8e-40	154	254	40.55
Naga_101571g1	Nannochloropsis gaditana	6e-30	125	141	46.10
emh07790	Emiliania huxleyi	3e-18	90.9	107	44.86
OS01G56960	Oryza sativa	4e-09	64.3	144	33.33

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment