Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
RCC4223.27g00520	Picochlorum_RCC4223	0.0	878	424	100.00
PI00G52420	Picochlorum sp. SENEW3 (SE3)	0.0	699	398	87.44
HE0000G59730	Helicosporidium sp.	2e-61	205	202	50.99
AP00G43750	Auxenochlorella protothecoides	1e-54	193	249	44.18
OL04G00330	Ostreococcus lucimarinus	9e-46	171	277	37.91
ORCC809_04G04820	Ostreococcus sp RCC809	1e-45	171	277	37.18
OT_04G00380	Ostreococcus tauri	4e-45	169	272	37.87
OM_02G00410	Ostreococcus mediterraneus	1e-44	168	275	36.00
CNC64A_031G00050	Chlorella sp NC64A	2e-44	156	110	63.64
OS12G33090	Oryza sativa	4e-42	161	226	43.36
AT5G58620	Arabidopsis thaliana	6e-41	157	256	36.72
AP00G21050	Auxenochlorella protothecoides	9e-41	154	183	43.72
AT2G40140	Arabidopsis thaliana	1e-40	157	245	38.37
PI00G69120	Picochlorum sp. SENEW3 (SE3)	3e-40	155	150	49.33
VC00G114470	Volvox carteri	3e-40	158	124	53.23
RCC4223.04g03100	Picochlorum_RCC4223	4e-40	155	148	47.30
CR13G01070	Chlamydomonas reinhardtii	4e-40	156	124	52.42
ATR_00007G00600	Amborella trichopoda	1e-38	151	267	36.70
OS03G49170	Oryza sativa	2e-38	151	142	48.59
CR03G01290	Chlamydomonas reinhardtii	3e-38	152	237	37.97
AT5G07500	Arabidopsis thaliana	4e-38	144	117	57.26
OS07G38090	Oryza sativa	4e-38	150	119	57.14
OS01G09620	Oryza sativa	5e-38	147	131	54.96
OS05G10670	Oryza sativa	5e-38	148	116	58.62
AT2G25900	Arabidopsis thaliana	6e-38	145	109	56.88
ATR_00056G01910	Amborella trichopoda	9e-38	147	109	59.63
AT3G55980	Arabidopsis thaliana	3e-37	147	246	36.59
AT4G29190	Arabidopsis thaliana	4e-37	144	109	61.47
CNC64A_027G00460	Chlorella sp NC64A	4e-37	145	114	57.89
AT2G41900	Arabidopsis thaliana	4e-37	147	117	53.85
AT2G19810	Arabidopsis thaliana	4e-37	144	109	60.55
MRCC299_09G06170	Micromonas sp RCC299	4e-37	143	111	57.66
CNC64A_032G00580	Chlorella sp NC64A	6e-37	145	118	55.08
ATR_00103G01160	Amborella trichopoda	8e-37	147	117	54.70
VC00G46840	Volvox carteri	2e-36	144	176	42.05
OS05G03760	Oryza sativa	3e-36	144	234	36.32
PP00177G00540	Physcomitrella patens	8e-36	143	109	55.05
AT5G12850	Arabidopsis thaliana	1e-35	143	117	52.14
MP18G00140	Micromonas pusilla strain CCMP1545	6e-35	142	116	56.90
PP00297G00180	Physcomitrella patens	6e-35	140	109	54.13
PP00297G00210	Physcomitrella patens	8e-35	140	109	54.13
AC00G08770	Asterochloris sp. Cgr-DA1pho v2.0	2e-34	129	102	55.88
VC00G06970	Volvox carteri	3e-34	139	109	55.05
CV00G65940	Coccomyxa subellipsoidea C-169	4e-34	130	115	53.04
ATR_00183G00270	Amborella trichopoda	1e-33	134	118	55.08
CV00G26700	Coccomyxa subellipsoidea C-169	1e-33	138	128	49.22
AC00G15200	Asterochloris sp. Cgr-DA1pho v2.0	1e-33	127	101	57.43
AT1G03790	Arabidopsis thaliana	6e-33	132	128	50.00
CR07G03570	Chlamydomonas reinhardtii	8e-33	135	109	53.21
CV00G26920	Coccomyxa subellipsoidea C-169	1e-32	125	106	51.89
PI00G20380	Picochlorum sp. SENEW3 (SE3)	2e-32	131	112	50.00
RCC4223.02g05210	Picochlorum_RCC4223	4e-32	130	112	49.11
AT5G44260	Arabidopsis thaliana	9e-32	129	110	55.45
RCC4223.10g00130	Picochlorum_RCC4223	1e-31	128	115	49.57
PI00G20210	Picochlorum sp. SENEW3 (SE3)	1e-31	128	112	50.00
OS01G53650	Oryza sativa	2e-31	124	181	40.33
CV00G62680	Coccomyxa subellipsoidea C-169	4e-31	120	128	46.09
RCC4223.02g07020	Picochlorum_RCC4223	4e-31	128	110	52.73
CNC64A_011G02030	Chlorella sp NC64A	5e-31	130	120	50.83
CNC64A_022G00910	Chlorella sp NC64A	6e-31	128	124	51.61
AP00G63440	Auxenochlorella protothecoides	7e-31	127	115	51.30
PI00G60270	Picochlorum sp. SENEW3 (SE3)	7e-31	127	110	52.73
OS05G45020	Oryza sativa	1e-30	123	122	50.00
HE0000G23110	Helicosporidium sp.	2e-30	120	115	48.70
HE0000G34190	Helicosporidium sp.	1e-29	117	93	55.91
CNC64A_011G02840	Chlorella sp NC64A	2e-29	125	120	48.33
CR03G00630	Chlamydomonas reinhardtii	2e-28	122	107	53.27
VC00G84140	Volvox carteri	1e-27	120	112	50.00
VC00G66550	Volvox carteri	2e-26	116	110	49.09
BPRRCC1105_07G00610	Bathycoccus prasinos	2e-26	113	121	42.98
CR01G01910	Chlamydomonas reinhardtii	2e-26	116	110	48.18
CV00G00500	Coccomyxa subellipsoidea C-169	1e-25	103	86	56.98
AC00G64350	Asterochloris sp. Cgr-DA1pho v2.0	3e-24	109	177	38.98
CR01G06770	Chlamydomonas reinhardtii	1e-23	107	107	48.60
OS07G47240	Oryza sativa	6e-23	101	116	47.41
PP00241G00660	Physcomitrella patens	3e-22	95.5	102	43.14
VC00G18210	Volvox carteri	6e-22	102	107	46.73
AP00G48130	Auxenochlorella protothecoides	3e-17	87.4	57	57.89
CV00G85110	Coccomyxa subellipsoidea C-169	6e-15	80.5	49	67.35
HE0000G46030	Helicosporidium sp.	1e-11	67.0	64	48.44
pte551940	Paramecium tetraurelia	6e-11	68.2	126	34.13
pte483930	Paramecium tetraurelia	7e-11	67.8	126	34.13
pte457040	Paramecium tetraurelia	6e-10	64.7	126	33.33
pte107710	Paramecium tetraurelia	1e-09	63.9	103	34.95
FBgn0004395	Drosophila melanogaster	1e-09	63.9	155	27.10
PP00229G00440	Physcomitrella patens	4e-09	57.8	55	45.45
pte177390	Paramecium tetraurelia	4e-09	62.4	125	30.40
PP00117G00880	Physcomitrella patens	9e-09	56.6	55	45.45
ENSG00000132478	Homo sapiens	1e-08	61.6	109	33.94
pte229880	Paramecium tetraurelia	5e-08	58.9	125	28.80
pte220010	Paramecium tetraurelia	9e-08	58.2	135	32.59
pte297100	Paramecium tetraurelia	1e-07	57.4	120	30.00
pte435530	Paramecium tetraurelia	1e-07	57.4	134	32.84
PP00489G00130	Physcomitrella patens	1e-07	53.5	53	43.40
pte379100	Paramecium tetraurelia	3e-06	52.8	111	30.63

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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