Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
RCC4223.09g01180	Picochlorum_RCC4223	0.0	2441	1179	100.00
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	2310	1179	95.17
CNC64A_005G01870	Chlorella sp NC64A	0.0	1433	1147	64.25
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	1280	1190	57.65
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	899	652	68.87
PP00112G00240	Physcomitrella patens	0.0	880	1100	47.36
MRCC299_04G04580	Micromonas sp RCC299	0.0	843	1106	46.84
OS01G56980	Oryza sativa	0.0	839	1129	45.17
OT_03G03070	Ostreococcus tauri	0.0	815	1026	47.76
AP00G16430	Auxenochlorella protothecoides	0.0	788	799	54.07
OM_09G03190	Ostreococcus mediterraneus	0.0	797	1068	45.04
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	668	657	54.03
CR03G09710	Chlamydomonas reinhardtii	0.0	678	516	64.53
VC00G146720	Volvox carteri	0.0	677	510	64.90
ATR_00054G00710	Amborella trichopoda	0.0	654	628	56.05
AT3G01310	Arabidopsis thaliana	0.0	649	654	55.35
PP00070G01260	Physcomitrella patens	0.0	648	641	55.85
OS03G48300	Oryza sativa	0.0	645	635	55.12
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	660	684	54.24
AT5G15070	Arabidopsis thaliana	0.0	641	635	55.59
OL03G03010	Ostreococcus lucimarinus	0.0	640	660	51.52
HE0000G10040	Helicosporidium sp.	0.0	615	452	68.81
FBgn0027279	Drosophila melanogaster	6e-168	550	619	49.92
TP02G08430	Thalassiosira pseudonana	7e-168	528	613	48.45
ENSG00000145725	Homo sapiens	2e-167	537	612	51.31
phs362880	Phytophtora sojae	3e-166	530	683	47.58
WBGene00018508	Caenorhabditis elegans	4e-166	535	639	49.30
FC005G10040	Fragilariopsis cylindrus	1e-162	511	669	45.14
AA0014G02190	Aureococcus anophagefferens	2e-156	493	650	44.00
emh483710	Emiliania huxleyi	2e-152	490	633	43.29
CR01G11320	Chlamydomonas reinhardtii	1e-145	492	329	68.09
BPRRCC1105_09G03180	Bathycoccus prasinos	4e-126	428	470	53.19
emh92080	Emiliania huxleyi	1e-125	410	828	36.96
VC00G13030	Volvox carteri	2e-125	433	402	54.98
emh565740	Emiliania huxleyi	2e-124	406	536	46.27
emh375850	Emiliania huxleyi	4e-124	406	536	46.27
pte664940	Paramecium tetraurelia	3e-115	390	472	48.09
pte599340	Paramecium tetraurelia	3e-113	385	472	47.46
SPCC1672.06c	Schizosaccharomyces pombe	2e-105	360	598	38.13
PTI_11G00860	Phaeodactylum tricornutum	1e-95	339	328	52.74
phs223530	Phytophtora sojae	1e-94	331	277	57.40
ES0425G00030	Ectocarpus siliculosus	5e-94	334	463	41.47
emh739850	Emiliania huxleyi	9e-88	311	305	50.49
CM09G02100	Cyanidioschyzon merolae	4e-82	277	314	47.13
CM09G02370	Cyanidioschyzon merolae	2e-81	275	314	46.82
gsu105930	Galdieria sulphuraria	2e-80	275	344	43.02
DDB_G0284617	Dictyostelium discoideum	3e-77	268	311	46.30
ccr179200	Chondrus crispus	1e-55	201	257	44.36
HE0000G36530	Helicosporidium sp.	1e-50	184	218	44.95
OS01G56960	Oryza sativa	6e-27	119	249	35.34
Naga_101571g1	Nannochloropsis gaditana	6e-25	110	140	41.43
FC005G10050	Fragilariopsis cylindrus	1e-16	86.7	94	44.68
emh07790	Emiliania huxleyi	3e-13	75.1	107	40.19

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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