Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
RCC4223.04g03450	Picochlorum_RCC4223	0.0	1343	643	100.00
PI00G51280	Picochlorum sp. SENEW3 (SE3)	0.0	1240	643	94.25
AP00G21430	Auxenochlorella protothecoides	0.0	766	563	65.36
HE0000G41170	Helicosporidium sp.	0.0	714	561	60.43
CNC64A_025G01180	Chlorella sp NC64A	0.0	684	566	58.30
CV00G12800	Coccomyxa subellipsoidea C-169	0.0	665	518	60.62
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	0.0	659	511	61.84
CV00G12810	Coccomyxa subellipsoidea C-169	0.0	577	448	64.06
MRCC299_10G04230	Micromonas sp RCC299	1e-162	482	498	47.39
MP16G01280	Micromonas pusilla strain CCMP1545	4e-161	479	460	50.43
BPRRCC1105_06G01240	Bathycoccus prasinos	7e-156	471	514	48.25
OL16G00900	Ostreococcus lucimarinus	2e-153	460	497	47.48
OM_17G00960	Ostreococcus mediterraneus	1e-148	451	504	46.43
OT_17G00830	Ostreococcus tauri	3e-148	447	508	46.65
ORCC809_16G01780	Ostreococcus sp RCC809	3e-140	427	498	45.78
AT5G03760	Arabidopsis thaliana	6e-128	395	506	40.51
PP00065G00990	Physcomitrella patens	1e-124	386	437	43.71
PP00036G00370	Physcomitrella patens	3e-123	383	437	43.02
PP00036G01070	Physcomitrella patens	6e-123	382	437	42.79
ATR_00040G02570	Amborella trichopoda	9e-123	382	503	39.36
OS02G09930	Oryza sativa	1e-121	378	439	43.51
AT5G22740	Arabidopsis thaliana	1e-121	379	448	42.19
AT1G24070	Arabidopsis thaliana	2e-120	376	509	39.10
AT2G35650	Arabidopsis thaliana	2e-120	376	472	41.31
AT1G23480	Arabidopsis thaliana	3e-119	373	440	41.82
OS06G42020	Oryza sativa	4e-119	372	463	41.47
PP00373G00150	Physcomitrella patens	4e-117	372	445	41.35
PP00019G01110	Physcomitrella patens	4e-117	372	445	41.57
PP00224G00220	Physcomitrella patens	2e-116	370	427	41.69
PP00162G00740	Physcomitrella patens	5e-116	369	445	41.35
AT4G13410	Arabidopsis thaliana	1e-113	358	435	40.92
OS03G07350	Oryza sativa	4e-113	357	520	37.31
AT5G16190	Arabidopsis thaliana	1e-112	352	452	40.71
AT3G56000	Arabidopsis thaliana	1e-112	355	506	37.55
AT3G28180	Arabidopsis thaliana	5e-112	358	434	41.47
OS03G56060	Oryza sativa	5e-112	351	372	44.35
OS08G33740	Oryza sativa	8e-112	355	484	39.26
OS07G03260	Oryza sativa	2e-111	357	439	41.69
ATR_00065G00270	Amborella trichopoda	5e-111	356	432	40.51
PP00089G01080	Physcomitrella patens	6e-111	356	387	42.64
OS05G43530	Oryza sativa	2e-110	354	522	37.36
AT2G24630	Arabidopsis thaliana	2e-110	354	429	38.93
AT4G31590	Arabidopsis thaliana	4e-110	353	429	39.16
ATR_00019G01680	Amborella trichopoda	1e-109	352	429	39.63
AT3G07330	Arabidopsis thaliana	3e-109	351	530	35.85
OS08G15420	Oryza sativa	7e-109	352	434	40.78
OS09G25900	Oryza sativa	9e-109	350	437	39.59
PP00015G00680	Physcomitrella patens	1e-108	350	430	40.93
OS07G43710	Oryza sativa	2e-108	346	501	36.93
OS01G56130	Oryza sativa	3e-108	348	536	36.38
AT4G16590	Arabidopsis thaliana	4e-108	339	397	43.07
AT4G07960	Arabidopsis thaliana	8e-106	342	521	36.28
PP00164G00010	Physcomitrella patens	2e-105	341	441	39.68
ATR_00013G02120	Amborella trichopoda	2e-105	340	430	40.93
OS02G51060	Oryza sativa	1e-103	332	506	35.97
OS03G26044	Oryza sativa	2e-102	330	483	37.68
OS10G26630	Oryza sativa	2e-101	326	378	42.33
OS06G12460	Oryza sativa	7e-99	322	496	36.29
ATR_00072G01360	Amborella trichopoda	4e-95	303	322	44.41
CR06G04470	Chlamydomonas reinhardtii	5e-94	310	445	39.55
VC00G68920	Volvox carteri	2e-91	301	441	38.55
emh181270	Emiliania huxleyi	2e-54	194	312	39.10
emh488170	Emiliania huxleyi	2e-54	194	312	39.10
OS09G26770	Oryza sativa	6e-53	194	331	34.44
ORCC809_20G02860	Ostreococcus sp RCC809	6e-26	117	353	26.91
OM_13G00450	Ostreococcus mediterraneus	1e-24	113	313	26.52
OL20G02910	Ostreococcus lucimarinus	1e-24	113	259	28.57
OT_14G02980	Ostreococcus tauri	5e-22	105	311	27.65
ES0200G00060	Ectocarpus siliculosus	1e-15	85.1	309	28.16
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	2e-11	70.9	305	25.90
ES0097G00300	Ectocarpus siliculosus	5e-11	70.1	198	27.78
ES0097G00210	Ectocarpus siliculosus	1e-10	69.3	237	26.16
DDB_G0269124	Dictyostelium discoideum	2e-09	65.5	300	25.67
ccr13740	Chondrus crispus	9e-09	62.8	305	20.66
PI00G46760	Picochlorum sp. SENEW3 (SE3)	1e-08	62.4	298	24.83
AP00G07320	Auxenochlorella protothecoides	3e-08	61.2	324	23.77
RCC4223.10g01020	Picochlorum_RCC4223	4e-08	60.8	298	25.17
PP00372G00370	Physcomitrella patens	4e-08	60.5	186	23.66
emh647580	Emiliania huxleyi	5e-08	60.5	361	22.16
CV00G28250	Coccomyxa subellipsoidea C-169	1e-07	59.3	224	25.89
ES0185G00090	Ectocarpus siliculosus	3e-07	57.8	323	24.15
CV00G13860	Coccomyxa subellipsoidea C-169	3e-07	57.8	174	25.29
Naga_100049g27	Nannochloropsis gaditana	1e-06	56.2	276	22.10
AC00G54710	Asterochloris sp. Cgr-DA1pho v2.0	1e-06	55.8	283	23.67
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	6e-06	53.9	295	22.71
AC00G02440	Asterochloris sp. Cgr-DA1pho v2.0	7e-06	53.5	307	21.17
CV00G01670	Coccomyxa subellipsoidea C-169	7e-06	53.5	225	24.89

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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