Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00489G00130	Physcomitrella patens	2e-38	127	61	100.00
PP00229G00440	Physcomitrella patens	1e-34	118	61	91.80
PP00117G00880	Physcomitrella patens	8e-32	110	54	96.30
PP00613G00070	Physcomitrella patens	5e-25	99.0	50	92.00
PP00415G00180	Physcomitrella patens	9e-25	98.2	45	95.56
PP00360G00170	Physcomitrella patens	2e-24	94.7	47	87.23
PP00229G00380	Physcomitrella patens	3e-24	96.7	57	78.95
PP00117G00780	Physcomitrella patens	7e-24	92.4	49	83.67
PP00251G00020	Physcomitrella patens	8e-24	97.4	49	87.76
PP00176G00030	Physcomitrella patens	4e-23	96.3	48	87.50
PP00177G00540	Physcomitrella patens	1e-19	85.9	53	71.70
OS01G09620	Oryza sativa	3e-19	83.2	53	67.92
AT2G25900	Arabidopsis thaliana	1e-18	80.5	53	64.15
PP00297G00180	Physcomitrella patens	1e-18	82.8	53	67.92
PP00297G00210	Physcomitrella patens	1e-18	82.8	53	67.92
AT4G29190	Arabidopsis thaliana	4e-18	79.7	53	64.15
ATR_00056G01910	Amborella trichopoda	4e-18	80.9	53	64.15
OS05G10670	Oryza sativa	5e-18	80.9	53	67.92
AT2G19810	Arabidopsis thaliana	8e-18	79.3	53	64.15
VC00G114470	Volvox carteri	1e-17	80.5	54	62.96
AC00G15200	Asterochloris sp. Cgr-DA1pho v2.0	2e-17	74.7	54	66.67
CR13G01070	Chlamydomonas reinhardtii	3e-17	79.3	54	62.96
MRCC299_09G06170	Micromonas sp RCC299	7e-17	76.6	53	62.26
CNC64A_027G00460	Chlorella sp NC64A	1e-16	77.0	54	64.81
AT5G58620	Arabidopsis thaliana	1e-16	77.4	53	56.60
AT2G41900	Arabidopsis thaliana	2e-16	76.6	53	56.60
ATR_00183G00270	Amborella trichopoda	4e-16	74.3	54	62.96
ORCC809_04G04820	Ostreococcus sp RCC809	6e-16	75.1	53	58.49
OM_02G00410	Ostreococcus mediterraneus	6e-16	75.1	53	54.72
ATR_00007G00600	Amborella trichopoda	1e-15	74.7	53	60.38
ATR_00103G01160	Amborella trichopoda	1e-15	74.7	53	56.60
MP18G00140	Micromonas pusilla strain CCMP1545	5e-15	73.2	53	58.49
CNC64A_031G00050	Chlorella sp NC64A	6e-15	68.6	53	58.49
AT5G12850	Arabidopsis thaliana	8e-15	72.4	53	52.83
OS03G49170	Oryza sativa	8e-15	72.4	53	58.49
OL04G00330	Ostreococcus lucimarinus	1e-14	71.2	53	54.72
OT_04G00380	Ostreococcus tauri	2e-14	70.9	53	54.72
PP00241G00660	Physcomitrella patens	8e-14	65.5	53	54.72
RCC4223.02g07020	Picochlorum_RCC4223	1e-13	68.9	54	55.56
PI00G60270	Picochlorum sp. SENEW3 (SE3)	1e-13	68.6	54	55.56
AT5G44260	Arabidopsis thaliana	2e-13	67.4	54	55.56
AP00G43750	Auxenochlorella protothecoides	4e-13	66.6	53	56.60
AT3G55980	Arabidopsis thaliana	6e-13	66.6	53	50.94
CR03G01290	Chlamydomonas reinhardtii	7e-13	67.0	57	45.61
HE0000G59730	Helicosporidium sp.	7e-13	63.9	53	50.94
OS05G03760	Oryza sativa	9e-13	66.2	54	55.56
VC00G06970	Volvox carteri	9e-13	66.2	53	56.60
VC00G46840	Volvox carteri	1e-12	65.9	57	45.61
CV00G26700	Coccomyxa subellipsoidea C-169	1e-12	66.2	54	55.56
CR07G03570	Chlamydomonas reinhardtii	1e-12	66.2	53	56.60
AT1G03790	Arabidopsis thaliana	1e-12	65.1	54	53.70
CV00G65940	Coccomyxa subellipsoidea C-169	3e-12	62.0	54	55.56
PI00G69120	Picochlorum sp. SENEW3 (SE3)	3e-12	64.7	57	45.61
OS12G33090	Oryza sativa	4e-12	64.7	54	53.70
AT2G40140	Arabidopsis thaliana	6e-12	63.9	53	50.94
AC00G08770	Asterochloris sp. Cgr-DA1pho v2.0	2e-11	58.9	57	45.61
CV00G62680	Coccomyxa subellipsoidea C-169	4e-11	58.5	54	51.85
RCC4223.04g03100	Picochlorum_RCC4223	6e-11	60.8	57	45.61
HE0000G34190	Helicosporidium sp.	2e-10	56.6	54	51.85
AT5G07500	Arabidopsis thaliana	2e-10	57.4	53	50.94
CNC64A_032G00580	Chlorella sp NC64A	3e-10	58.9	57	43.86
PI00G20210	Picochlorum sp. SENEW3 (SE3)	4e-10	57.8	55	54.55
RCC4223.10g00130	Picochlorum_RCC4223	6e-10	57.4	54	51.85
CV00G26920	Coccomyxa subellipsoidea C-169	6e-10	55.1	53	49.06
AP00G21050	Auxenochlorella protothecoides	9e-10	57.0	57	43.86
OS07G38090	Oryza sativa	1e-09	57.4	54	44.44
PP00471G00060	Physcomitrella patens	5e-09	51.6	31	70.97
CNC64A_011G02030	Chlorella sp NC64A	7e-09	55.5	57	47.37
OS05G45020	Oryza sativa	8e-09	53.5	56	42.86
PI00G52420	Picochlorum sp. SENEW3 (SE3)	8e-09	54.7	53	43.40
AP00G63440	Auxenochlorella protothecoides	8e-09	54.7	54	48.15
CNC64A_011G02840	Chlorella sp NC64A	1e-08	54.3	54	48.15
PP00489G00090	Physcomitrella patens	2e-08	51.6	54	50.00
RCC4223.27g00520	Picochlorum_RCC4223	2e-08	53.5	53	43.40
OS01G53650	Oryza sativa	3e-08	51.6	59	40.68
PI00G20380	Picochlorum sp. SENEW3 (SE3)	8e-08	51.6	54	44.44
PP00229G00420	Physcomitrella patens	8e-08	49.3	54	48.15
RCC4223.02g05210	Picochlorum_RCC4223	9e-08	51.6	54	44.44
PP00039G00020	Physcomitrella patens	2e-07	47.8	54	48.15
PP00210G00040	Physcomitrella patens	2e-07	47.8	54	48.15
PP00117G00920	Physcomitrella patens	2e-07	47.8	54	48.15
CNC64A_022G00910	Chlorella sp NC64A	4e-07	50.1	54	42.59
PP00208G00050	Physcomitrella patens	4e-07	47.0	54	46.30
PP00001G00750	Physcomitrella patens	6e-07	47.8	54	48.15
CR01G01910	Chlamydomonas reinhardtii	7e-07	49.7	52	44.23
VC00G66550	Volvox carteri	4e-06	47.0	53	41.51
PP00039G00190	Physcomitrella patens	5e-06	44.3	30	60.00
PP00613G00020	Physcomitrella patens	5e-06	43.5	28	64.29
PP00004G01980	Physcomitrella patens	6e-06	45.1	54	46.30
CR01G06770	Chlamydomonas reinhardtii	7e-06	46.2	52	42.31
VC00G84140	Volvox carteri	9e-06	46.2	54	40.74

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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