Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00309G00230	Physcomitrella patens	0.0	619	296	100.00
PP00168G00160	Physcomitrella patens	0.0	509	297	80.47
PP00004G00240	Physcomitrella patens	2e-172	486	297	78.11
PP00004G00260	Physcomitrella patens	1e-115	343	285	54.04
PP00309G00220	Physcomitrella patens	6e-113	336	263	56.27
PP00168G00050	Physcomitrella patens	1e-106	320	250	58.00
PP00026G00650	Physcomitrella patens	3e-105	316	256	55.08
AT4G03210	Arabidopsis thaliana	6e-100	302	281	47.33
ATR_00016G02940	Amborella trichopoda	1e-99	301	249	54.62
ATR_00019G03550	Amborella trichopoda	5e-99	299	282	48.94
AT5G13870	Arabidopsis thaliana	6e-99	300	270	50.74
AT5G65730	Arabidopsis thaliana	3e-97	295	283	49.47
ATR_00026G01160	Amborella trichopoda	1e-96	293	280	48.57
ATR_00019G03570	Amborella trichopoda	5e-95	289	282	51.42
ATR_00062G00050	Amborella trichopoda	3e-94	287	279	49.10
OS11G33270	Oryza sativa	1e-93	286	293	46.42
ATR_00062G00020	Amborella trichopoda	6e-93	284	278	49.28
PP00291G00470	Physcomitrella patens	1e-92	284	275	48.36
PP00309G00140	Physcomitrella patens	2e-92	283	289	47.40
AT4G37800	Arabidopsis thaliana	2e-92	283	287	47.39
PP00193G00050	Physcomitrella patens	4e-92	284	267	48.69
AT2G06850	Arabidopsis thaliana	6e-92	281	242	52.07
PP00272G00150	Physcomitrella patens	1e-91	280	278	49.28
ATR_00026G01070	Amborella trichopoda	3e-91	279	270	50.00
ATR_00453G00010	Amborella trichopoda	3e-91	281	272	45.96
PP00618G00010	Physcomitrella patens	3e-90	281	275	47.64
ATR_00019G03590	Amborella trichopoda	6e-89	275	307	46.25
AT2G14620	Arabidopsis thaliana	6e-88	271	248	50.40
OS06G48200	Oryza sativa	1e-87	270	284	46.83
AT3G23730	Arabidopsis thaliana	1e-85	265	294	42.86
AT4G25810	Arabidopsis thaliana	1e-85	265	294	46.26
OS06G48160	Oryza sativa	2e-85	265	299	44.15
AT1G11545	Arabidopsis thaliana	3e-85	265	282	46.45
AT5G57530	Arabidopsis thaliana	2e-84	262	251	50.60
ATR_00004G02430	Amborella trichopoda	7e-84	261	249	49.00
AT5G57540	Arabidopsis thaliana	7e-84	260	267	48.69
AT5G57550	Arabidopsis thaliana	3e-83	259	289	44.64
ATR_00065G01770	Amborella trichopoda	2e-82	257	294	45.92
OS07G34580	Oryza sativa	3e-82	257	304	43.75
AT4G14130	Arabidopsis thaliana	5e-82	256	276	43.48
AT5G57560	Arabidopsis thaliana	1e-81	255	282	45.39
AT2G18800	Arabidopsis thaliana	4e-81	254	290	44.83
ATR_00026G01110	Amborella trichopoda	1e-80	249	212	52.83
ATR_00065G01750	Amborella trichopoda	2e-80	252	280	47.50
AT4G30270	Arabidopsis thaliana	6e-80	250	245	47.76
AT5G48070	Arabidopsis thaliana	9e-79	247	278	43.17
PP00195G00150	Physcomitrella patens	1e-78	248	245	48.16
AT4G13090	Arabidopsis thaliana	1e-78	248	251	49.00
AT3G25050	Arabidopsis thaliana	1e-78	247	272	45.96
OS04G51460	Oryza sativa	4e-77	243	291	43.30
OS04G51520	Oryza sativa	5e-77	244	282	43.97
AT4G28850	Arabidopsis thaliana	6e-76	240	295	42.03
OS06G48180	Oryza sativa	5e-75	238	280	42.50
AT4G25820	Arabidopsis thaliana	3e-74	236	275	43.64
PP00213G00650	Physcomitrella patens	4e-74	236	303	40.59
PP00410G00130	Physcomitrella patens	5e-74	236	301	43.19
ATR_00026G01130	Amborella trichopoda	1e-73	231	192	54.69
OS06G48170	Oryza sativa	2e-73	234	242	43.39
AT4G30280	Arabidopsis thaliana	8e-72	229	287	42.51
AT1G65310	Arabidopsis thaliana	3e-71	228	264	44.32
PP00122G00290	Physcomitrella patens	7e-71	228	255	45.49
OS08G13920	Oryza sativa	5e-70	225	270	44.44
OS08G14200	Oryza sativa	2e-69	223	241	45.64
OS04G51450	Oryza sativa	2e-69	224	271	42.07
AT4G30290	Arabidopsis thaliana	5e-69	222	278	42.45
ATR_00062G00060	Amborella trichopoda	7e-68	216	194	51.03
AT4G13080	Arabidopsis thaliana	7e-68	219	242	44.21
PP00156G00440	Physcomitrella patens	3e-67	218	285	40.35
PP00156G00420	Physcomitrella patens	3e-67	218	285	40.35
PP00309G00200	Physcomitrella patens	4e-67	216	234	46.15
OS08G14210	Oryza sativa	2e-66	218	296	39.53
PP00486G00100	Physcomitrella patens	3e-64	210	242	43.80
PP00486G00080	Physcomitrella patens	3e-64	210	242	43.80
PP00019G00220	Physcomitrella patens	3e-63	207	285	41.40
OS06G22919	Oryza sativa	2e-62	206	306	37.25
OS10G02770	Oryza sativa	7e-62	206	266	40.23
OS02G17900	Oryza sativa	3e-60	200	258	39.92
ATR_00109G01360	Amborella trichopoda	3e-60	197	198	43.43
OS08G13980	Oryza sativa	4e-60	200	249	42.97
PP00081G01240	Physcomitrella patens	1e-59	198	288	38.54
PP00011G01530	Physcomitrella patens	1e-59	199	252	40.87
AT1G32170	Arabidopsis thaliana	3e-59	199	267	40.45
PP00048G00500	Physcomitrella patens	4e-59	197	281	39.50
OS02G17880	Oryza sativa	1e-57	193	232	40.95
PP00346G00070	Physcomitrella patens	1e-56	193	276	38.41
ATR_00024G00080	Amborella trichopoda	2e-56	191	264	40.53
PP00141G00620	Physcomitrella patens	4e-56	189	291	35.74
PP00089G00910	Physcomitrella patens	5e-56	189	259	39.77
OS06G13040	Oryza sativa	1e-55	189	262	39.31
AT1G10550	Arabidopsis thaliana	2e-55	188	280	36.07
AT4G18990	Arabidopsis thaliana	6e-55	188	277	38.27
ATR_00013G00910	Amborella trichopoda	2e-54	182	226	42.04
PP00074G00080	Physcomitrella patens	3e-54	188	258	39.53
OS09G23220	Oryza sativa	5e-54	185	276	36.59
AT2G01850	Arabidopsis thaliana	5e-54	185	295	36.27
AT1G14720	Arabidopsis thaliana	3e-53	183	252	39.68
ATR_00026G01150	Amborella trichopoda	6e-53	177	158	49.37
PP00005G00910	Physcomitrella patens	1e-52	184	260	38.46
OS03G13570	Oryza sativa	1e-52	181	266	37.59
OS02G03550	Oryza sativa	2e-52	181	257	39.69
ATR_00082G00420	Amborella trichopoda	6e-52	178	238	41.18
AT2G36870	Arabidopsis thaliana	6e-51	176	252	38.89
OS04G51510	Oryza sativa	8e-51	174	274	36.13
AT3G44990	Arabidopsis thaliana	1e-50	175	240	40.00
OS07G29750	Oryza sativa	4e-49	171	297	35.02
ATR_00048G00580	Amborella trichopoda	3e-47	166	235	40.00
OS03G63760	Oryza sativa	1e-46	166	307	34.53
OS03G01800	Oryza sativa	3e-46	164	256	35.16
OS02G57770	Oryza sativa	3e-46	164	243	37.86
OS10G39840	Oryza sativa	6e-45	160	269	35.69
OS02G46910	Oryza sativa	2e-43	157	220	41.82
ATR_00019G03580	Amborella trichopoda	5e-43	150	115	58.26
AT3G48580	Arabidopsis thaliana	7e-43	154	251	35.46
PP00089G00960	Physcomitrella patens	2e-38	142	152	47.37
OS10G42670	Oryza sativa	2e-38	144	287	34.49
ATR_00055G01550	Amborella trichopoda	4e-29	113	116	45.69
PP00002G02710	Physcomitrella patens	1e-28	110	76	71.05
ATR_00337G00020	Amborella trichopoda	2e-22	94.7	103	47.57
ATR_00069G00950	Amborella trichopoda	7e-21	93.2	178	31.46
ATR_00062G00010	Amborella trichopoda	2e-20	90.9	63	65.08
PP00353G00180	Physcomitrella patens	4e-20	91.3	156	36.54
PP00024G01140	Physcomitrella patens	2e-19	92.4	183	33.88
OS03G02610	Oryza sativa	4e-18	86.3	182	35.16
ATR_00062G00030	Amborella trichopoda	5e-18	82.0	104	40.38
ATR_00004G02620	Amborella trichopoda	2e-16	77.0	55	58.18
ATR_01729G00020	Amborella trichopoda	3e-16	76.3	64	53.12
PP00037G01500	Physcomitrella patens	5e-15	79.0	171	28.65
YLR213C	Saccharomyces cerevisiae strain S288C	6e-12	69.3	204	31.86
ATR_00065G01730	Amborella trichopoda	6e-09	56.6	41	53.66
YGR189C	Saccharomyces cerevisiae strain S288C	1e-07	56.6	154	28.57
OS04G53950	Oryza sativa	8e-07	53.5	49	48.98

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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