Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00117G00800	Physcomitrella patens	1e-163	457	219	100.00
PP00176G00030	Physcomitrella patens	5e-90	290	196	70.41
PP00039G00150	Physcomitrella patens	4e-72	227	179	63.13
PP00131G00100	Physcomitrella patens	4e-68	228	237	51.90
PP00360G00170	Physcomitrella patens	1e-67	212	127	78.74
PP00066G00950	Physcomitrella patens	1e-67	227	237	51.48
PP00613G00070	Physcomitrella patens	5e-65	212	235	51.49
PP00208G00160	Physcomitrella patens	9e-60	199	191	56.54
ATR_00056G00740	Amborella trichopoda	9e-59	202	257	45.14
PP00332G00080	Physcomitrella patens	6e-58	186	142	64.08
OS01G54100	Oryza sativa	1e-54	190	258	43.02
PP00208G00300	Physcomitrella patens	2e-54	176	113	74.34
PP00039G00180	Physcomitrella patens	2e-54	181	157	59.24
OS05G11140	Oryza sativa	2e-54	189	237	44.73
ATR_00078G01780	Amborella trichopoda	6e-54	189	233	46.35
AT2G25760	Arabidopsis thaliana	7e-54	188	259	42.08
ATR_00024G01320	Amborella trichopoda	1e-52	185	237	42.62
OS01G10150	Oryza sativa	2e-52	184	236	42.80
AT3G13670	Arabidopsis thaliana	7e-49	174	263	39.54
AT3G03940	Arabidopsis thaliana	6e-48	172	233	42.92
AT5G18190	Arabidopsis thaliana	6e-48	171	233	43.78
OS03G57940	Oryza sativa	7e-48	171	233	42.92
VC00G78160	Volvox carteri	2e-47	170	257	40.08
CR16G05270	Chlamydomonas reinhardtii	4e-47	169	257	40.08
OS07G07560	Oryza sativa	5e-47	169	228	43.42
PP00251G00020	Physcomitrella patens	5e-47	168	112	73.21
PP00496G00080	Physcomitrella patens	8e-47	163	104	75.96
OS01G56580	Oryza sativa	6e-46	166	230	42.61
CV00G41480	Coccomyxa subellipsoidea C-169	8e-44	159	254	38.58
PP00489G00140	Physcomitrella patens	3e-43	156	104	73.08
AC00G23780	Asterochloris sp. Cgr-DA1pho v2.0	2e-42	156	260	37.31
CNC64A_004G04950	Chlorella sp NC64A	2e-42	156	265	36.98
PP00229G00380	Physcomitrella patens	3e-42	152	169	49.11
MRCC299_05G01370	Micromonas sp RCC299	2e-41	153	236	38.14
BPRRCC1105_03G02050	Bathycoccus prasinos	5e-41	151	244	37.30
PP00471G00020	Physcomitrella patens	1e-40	149	104	72.12
OM_04G04510	Ostreococcus mediterraneus	2e-40	150	235	36.60
MP03G08100	Micromonas pusilla strain CCMP1545	8e-40	149	230	37.39
RCC4223.15g01080	Picochlorum_RCC4223	9e-40	148	229	37.55
PP00039G00130	Physcomitrella patens	1e-39	144	126	58.73
PI00G48380	Picochlorum sp. SENEW3 (SE3)	8e-39	145	229	37.99
OT_02G03460	Ostreococcus tauri	1e-38	145	229	37.12
OL02G01140	Ostreococcus lucimarinus	1e-38	145	263	35.74
ORCC809_02G03800	Ostreococcus sp RCC809	2e-38	144	235	36.17
PP00001G00790	Physcomitrella patens	3e-37	132	83	74.70
PP00210G00010	Physcomitrella patens	8e-36	134	79	75.95
CR06G09250	Chlamydomonas reinhardtii	1e-35	137	257	34.63
AP00G54810	Auxenochlorella protothecoides	2e-35	135	179	45.25
PP00132G00470	Physcomitrella patens	1e-34	124	80	72.50
VC00G68260	Volvox carteri	4e-34	133	257	33.85
AP00G03350	Auxenochlorella protothecoides	9e-33	128	230	36.52
PP00117G00860	Physcomitrella patens	1e-32	123	94	64.89
PP00211G00010	Physcomitrella patens	2e-29	115	78	74.36
PP00129G00700	Physcomitrella patens	1e-28	115	95	58.95
PP00039G00050	Physcomitrella patens	2e-27	107	93	56.99
AC00G84950	Asterochloris sp. Cgr-DA1pho v2.0	3e-24	105	235	30.21
CV00G53660	Coccomyxa subellipsoidea C-169	2e-23	103	268	29.85
PP00039G00120	Physcomitrella patens	9e-23	95.9	55	81.82
PP00210G00120	Physcomitrella patens	8e-22	93.6	70	67.14
PP00096G01110	Physcomitrella patens	3e-21	92.0	121	45.45
PP00208G00570	Physcomitrella patens	1e-20	89.0	54	74.07
PP01655G00010	Physcomitrella patens	2e-20	87.8	106	47.17
PP01655G00020	Physcomitrella patens	2e-20	87.8	54	75.93
PP00360G00180	Physcomitrella patens	8e-20	89.4	51	78.43
CNC64A_003G03610	Chlorella sp NC64A	1e-19	90.5	159	36.48
HE0000G20190	Helicosporidium sp.	1e-18	88.6	130	37.69
PP00039G00090	Physcomitrella patens	4e-17	79.7	50	74.00
HE0000G57910	Helicosporidium sp.	1e-15	77.0	55	65.45
PP00039G00100	Physcomitrella patens	1e-13	70.9	44	75.00
PP00208G00290	Physcomitrella patens	1e-13	69.3	46	69.57
AT3G03930	Arabidopsis thaliana	8e-12	66.6	55	54.55
CM06G00990	Cyanidioschyzon merolae	4e-11	65.9	115	33.04
HE0000G05520	Helicosporidium sp.	3e-10	62.0	81	44.44
gsu93510	Galdieria sulphuraria	1e-08	58.2	113	31.86
RCC4223.01g07310	Picochlorum_RCC4223	8e-07	52.8	51	47.06
pte96450	Paramecium tetraurelia	3e-06	51.2	72	41.67
pte580780	Paramecium tetraurelia	6e-06	50.1	76	38.16
pte406000	Paramecium tetraurelia	8e-06	49.7	57	43.86

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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