Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00007G02290	Physcomitrella patens	2e-154	433	210	100.00
PP00171G00550	Physcomitrella patens	9e-104	305	213	73.71
PP00098G01150	Physcomitrella patens	2e-96	287	184	75.00
PP00034G01480	Physcomitrella patens	1e-88	287	192	71.35
AT1G11360	Arabidopsis thaliana	9e-78	240	174	66.67
ATR_00072G00070	Amborella trichopoda	5e-74	230	167	71.86
OS01G57450	Oryza sativa	6e-68	216	166	71.08
OS07G36600	Oryza sativa	7e-66	211	172	66.86
OS05G42230	Oryza sativa	8e-66	211	175	66.86
AT4G27320	Arabidopsis thaliana	5e-60	195	166	63.86
AT5G54430	Arabidopsis thaliana	1e-59	194	169	65.09
AT3G21210	Arabidopsis thaliana	6e-31	124	145	46.90
ATR_00165G00230	Amborella trichopoda	2e-20	89.4	166	33.73
ATR_00045G01790	Amborella trichopoda	1e-18	84.3	158	31.65
OS05G06500	Oryza sativa	1e-17	81.3	165	31.52
OS01G63010	Oryza sativa	3e-17	80.5	160	29.38
PP00336G00330	Physcomitrella patens	3e-17	82.4	165	38.18
MP03G02550	Micromonas pusilla strain CCMP1545	5e-17	80.5	167	34.13
ATR_00003G00120	Amborella trichopoda	1e-16	78.2	161	30.43
OS02G52314	Oryza sativa	1e-16	78.6	162	34.57
OS02G53320	Oryza sativa	3e-16	77.4	162	30.25
OS05G28740	Oryza sativa	3e-16	77.8	167	31.74
PP00001G01620	Physcomitrella patens	2e-15	75.1	167	31.74
ATR_00079G00520	Amborella trichopoda	2e-15	75.1	160	32.50
OS03G19270	Oryza sativa	2e-15	75.5	181	30.39
OS03G53900	Oryza sativa	4e-15	74.7	169	33.14
AT3G53990	Arabidopsis thaliana	5e-15	73.9	166	30.72
AT3G58450	Arabidopsis thaliana	7e-15	74.3	167	31.74
OS01G19820	Oryza sativa	8e-15	73.6	159	31.45
ATR_00085G00590	Amborella trichopoda	1e-14	73.2	166	30.12
PP00062G00920	Physcomitrella patens	1e-14	72.8	160	29.38
CR12G16810	Chlamydomonas reinhardtii	1e-14	72.4	156	32.69
OS12G36640	Oryza sativa	2e-14	72.4	164	29.27
AT3G17020	Arabidopsis thaliana	5e-14	70.9	163	28.22
AT1G09740	Arabidopsis thaliana	8e-14	70.5	166	31.93
AT2G47710	Arabidopsis thaliana	1e-13	70.1	158	27.85
MRCC299_14G01420	Micromonas sp RCC299	1e-13	73.6	162	33.33
AT3G62550	Arabidopsis thaliana	2e-13	69.7	157	32.48
PI00G66880	Picochlorum sp. SENEW3 (SE3)	2e-13	69.7	158	30.38
ATR_00016G03410	Amborella trichopoda	2e-13	69.3	158	31.65
CNC64A_020G01020	Chlorella sp NC64A	2e-13	72.0	157	29.94
RCC4223.13g02370	Picochlorum_RCC4223	2e-13	68.9	158	30.38
OS07G47620	Oryza sativa	3e-13	68.9	174	28.74
ATR_00045G03170	Amborella trichopoda	4e-13	68.6	165	29.70
PP00400G00060	Physcomitrella patens	9e-13	67.4	160	30.00
OS12G36630	Oryza sativa	3e-12	65.9	157	29.30
PP00133G00110	Physcomitrella patens	3e-12	66.2	163	30.06
CNC64A_004G02080	Chlorella sp NC64A	3e-12	65.9	146	31.51
BPRRCC1105_10G03230	Bathycoccus prasinos	3e-12	66.2	173	27.75
OS01G32780	Oryza sativa	2e-11	63.9	165	33.94
AT3G11930	Arabidopsis thaliana	2e-11	64.7	190	26.84
AP00G05950	Auxenochlorella protothecoides	3e-11	63.2	154	31.17
AT1G68300	Arabidopsis thaliana	3e-11	62.8	158	29.11
OS05G07810	Oryza sativa	1e-10	62.0	170	25.88
CNC64A_016G00920	Chlorella sp NC64A	1e-10	61.2	157	30.57
CR16G01750	Chlamydomonas reinhardtii	2e-10	60.8	165	29.09
AT3G03270	Arabidopsis thaliana	4e-10	60.5	134	30.60
OS10G30150	Oryza sativa	4e-10	60.1	182	28.02
VC00G42990	Volvox carteri	9e-10	61.6	133	31.58
AC00G52770	Asterochloris sp. Cgr-DA1pho v2.0	1e-09	58.2	155	29.68
CNC64A_010G02620	Chlorella sp NC64A	2e-09	57.8	165	33.33
VC00G96740	Volvox carteri	3e-09	57.4	161	29.19
AT2G21620	Arabidopsis thaliana	9e-09	56.6	160	29.38
CNC64A_001G00510	Chlorella sp NC64A	9e-09	58.2	161	28.57
AC00G12530	Asterochloris sp. Cgr-DA1pho v2.0	2e-08	54.7	147	28.57
HE0000G12710	Helicosporidium sp.	4e-08	54.3	160	28.75
ATR_00135G00050	Amborella trichopoda	5e-08	54.3	161	31.06
CNC64A_017G01310	Chlorella sp NC64A	6e-08	54.7	161	27.33
OS01G07590	Oryza sativa	1e-07	54.7	161	24.22
PP00082G00380	Physcomitrella patens	1e-07	53.1	159	29.56
AT2G03720	Arabidopsis thaliana	1e-07	52.8	179	24.58
OT_04G00030	Ostreococcus tauri	1e-07	53.9	169	28.40
OS03G25830	Oryza sativa	1e-07	51.6	33	69.70
BPRRCC1105_02G01900	Bathycoccus prasinos	2e-07	52.8	175	27.43
MP16G01050	Micromonas pusilla strain CCMP1545	2e-07	54.3	154	31.82
CV00G92270	Coccomyxa subellipsoidea C-169	2e-07	52.0	155	25.81
OS03G22390	Oryza sativa	3e-07	52.0	157	34.39
ATR_00024G00890	Amborella trichopoda	4e-07	51.6	133	27.07
AP00G31200	Auxenochlorella protothecoides	7e-07	52.4	170	30.00
VC00G35010	Volvox carteri	8e-07	52.4	164	28.66
ATR_00003G00130	Amborella trichopoda	1e-06	48.9	59	42.37
ATR_00105G00370	Amborella trichopoda	1e-06	49.7	133	27.07
OS05G37970	Oryza sativa	2e-06	50.1	153	30.72
SPAC167.05	Schizosaccharomyces pombe	3e-06	50.8	167	30.54
OS02G47840	Oryza sativa	4e-06	48.9	59	37.29
MRCC299_10G04470	Micromonas sp RCC299	7e-06	49.3	155	29.68
PI00G60170	Picochlorum sp. SENEW3 (SE3)	7e-06	49.7	168	28.57
PI00G62090	Picochlorum sp. SENEW3 (SE3)	9e-06	49.3	171	26.32

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
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