Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: PP00006G00160

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00006G00160	Physcomitrella patens	0.0	999	498	100.00
PP00051G00310	Physcomitrella patens	0.0	526	499	55.31
PP00150G00090	Physcomitrella patens	3e-140	421	358	57.82
ATR_00012G01410	Amborella trichopoda	1e-130	395	487	44.76
AT4G26830	Arabidopsis thaliana	2e-126	384	494	42.31
ATR_00112G00280	Amborella trichopoda	2e-125	381	498	42.37
ATR_00009G03570	Amborella trichopoda	5e-124	377	478	44.35
AT2G05790	Arabidopsis thaliana	3e-122	373	479	41.13
AT5G55180	Arabidopsis thaliana	7e-121	369	493	41.38
AT5G24318	Arabidopsis thaliana	5e-117	359	498	39.16
AT4G34480	Arabidopsis thaliana	5e-112	348	498	40.56
AT2G16230	Arabidopsis thaliana	2e-110	344	473	39.11
ATR_00056G01290	Amborella trichopoda	1e-108	340	481	38.25
PP00085G00580	Physcomitrella patens	4e-107	335	493	39.96
PP00270G00470	Physcomitrella patens	3e-106	333	479	39.87
PP00098G00250	Physcomitrella patens	2e-105	330	497	37.22
ATR_00059G00370	Amborella trichopoda	9e-104	325	474	39.24
OS03G46660	Oryza sativa	9e-101	319	474	38.19
AT5G42720	Arabidopsis thaliana	2e-100	316	410	44.15
AT4G29360	Arabidopsis thaliana	2e-100	319	491	35.44
PP00138G00240	Physcomitrella patens	3e-100	318	482	36.93
OS01G64170	Oryza sativa	5e-100	313	337	46.88
ATR_00100G00050	Amborella trichopoda	8e-100	314	345	47.83
AT2G27500	Arabidopsis thaliana	3e-99	311	328	47.56
ATR_00117G00360	Amborella trichopoda	2e-98	311	478	38.91
OS04G33640	Oryza sativa	3e-98	308	346	45.38
OS07G38930	Oryza sativa	1e-96	308	476	36.13
AT4G18340	Arabidopsis thaliana	4e-96	303	347	45.24
AT3G23770	Arabidopsis thaliana	9e-96	305	498	36.35
PP00218G00010	Physcomitrella patens	2e-95	305	506	36.96
ATR_00031G00240	Amborella trichopoda	4e-95	300	322	46.89
ATR_00117G00390	Amborella trichopoda	1e-94	302	492	36.38
PP00312G00180	Physcomitrella patens	8e-94	301	473	36.36
OS02G33000	Oryza sativa	9e-94	297	335	46.27
AT2G01630	Arabidopsis thaliana	2e-93	300	475	37.89
OS08G14700	Oryza sativa	3e-92	298	536	37.13
OS07G35510	Oryza sativa	8e-92	298	531	37.29
ATR_00078G00060	Amborella trichopoda	5e-91	291	336	42.26
AT4G14080	Arabidopsis thaliana	6e-91	292	484	35.95
AT1G30080	Arabidopsis thaliana	9e-91	290	334	44.61
OS01G53750	Oryza sativa	1e-90	291	477	35.01
AT3G07320	Arabidopsis thaliana	7e-90	289	488	35.45
OS06G40490	Oryza sativa	3e-89	286	324	44.14
AT1G66250	Arabidopsis thaliana	6e-89	288	483	37.27
AT2G26600	Arabidopsis thaliana	1e-88	284	343	41.11
AT3G15800	Arabidopsis thaliana	2e-88	283	325	44.31
AT5G42100	Arabidopsis thaliana	5e-88	283	337	43.62
AT1G32860	Arabidopsis thaliana	7e-88	283	323	43.03
OS06G34020	Oryza sativa	2e-87	283	325	46.15
OS02G10660	Oryza sativa	7e-86	277	327	42.51
OS09G32550	Oryza sativa	8e-86	279	517	34.62
AT3G55430	Arabidopsis thaliana	2e-85	277	478	37.66
ATR_00058G02370	Amborella trichopoda	3e-85	275	344	42.44
ATR_00060G01250	Amborella trichopoda	3e-85	279	343	42.57
AT1G11820	Arabidopsis thaliana	8e-85	277	476	35.71
OS07G35480	Oryza sativa	2e-84	277	512	36.91
PP00280G00250	Physcomitrella patens	4e-84	270	323	43.34
OS08G41410	Oryza sativa	3e-83	273	496	36.90
ATR_00068G00910	Amborella trichopoda	4e-83	273	477	33.75
PP00026G00770	Physcomitrella patens	3e-81	264	339	41.89
PP00001G00220	Physcomitrella patens	4e-81	267	479	36.33
OS07G35350	Oryza sativa	8e-81	268	549	34.97
OS07G35560	Oryza sativa	1e-80	268	557	34.83
PP00284G00010	Physcomitrella patens	3e-80	261	343	41.69
OS03G12140	Oryza sativa	6e-80	264	325	43.69
OS03G14210	Oryza sativa	4e-79	260	325	42.77
AT5G56590	Arabidopsis thaliana	6e-79	261	328	39.63
OS07G13580	Oryza sativa	2e-78	260	362	43.65
OS10G07290	Oryza sativa	5e-77	254	323	43.65
OS03G51240	Oryza sativa	6e-77	254	311	45.98
PP00197G00850	Physcomitrella patens	2e-76	253	348	43.39
PP00389G00270	Physcomitrella patens	5e-76	252	450	33.56
PP00053G00310	Physcomitrella patens	6e-76	252	337	44.21
OS11G47820	Oryza sativa	6e-76	253	331	40.79
OS07G35520	Oryza sativa	7e-76	255	536	33.96
AT2G39640	Arabidopsis thaliana	2e-74	251	471	34.39
AT3G13560	Arabidopsis thaliana	2e-74	250	335	41.19
OS06G04080	Oryza sativa	3e-74	248	335	42.69
PP00040G00940	Physcomitrella patens	4e-74	245	368	41.30
OS03G62860	Oryza sativa	3e-73	246	485	32.78
OS03G12620	Oryza sativa	5e-72	241	320	41.88
PP00070G01270	Physcomitrella patens	2e-71	240	324	42.28
AT3G46570	Arabidopsis thaliana	4e-71	236	348	42.82
PP00026G00780	Physcomitrella patens	7e-71	236	320	40.94
OS01G71830	Oryza sativa	7e-71	235	319	40.44
PP00268G00250	Physcomitrella patens	1e-70	238	327	41.59
OS01G71670	Oryza sativa	2e-69	231	316	43.04
AT3G61810	Arabidopsis thaliana	2e-68	230	327	38.23
PP00007G00270	Physcomitrella patens	5e-68	232	367	38.69
PP00190G00160	Physcomitrella patens	5e-67	228	324	40.12
OS01G71810	Oryza sativa	2e-66	223	319	38.87
ATR_00037G01070	Amborella trichopoda	2e-66	228	327	39.45
OS01G71820	Oryza sativa	2e-66	223	319	38.87
OS01G71350	Oryza sativa	2e-66	223	318	41.51
OS01G71380	Oryza sativa	3e-66	223	334	39.82
OS05G37130	Oryza sativa	2e-64	217	214	48.60
PP00145G00590	Physcomitrella patens	4e-64	222	328	40.55
AT3G57260	Arabidopsis thaliana	5e-64	217	333	37.24
AT3G57270	Arabidopsis thaliana	2e-63	216	321	37.38
OS01G71860	Oryza sativa	4e-63	223	322	39.75
OS01G71680	Oryza sativa	5e-63	215	324	38.58
PP00334G00320	Physcomitrella patens	5e-63	217	319	39.18
OS09G36280	Oryza sativa	2e-62	213	321	39.56
OS01G58730	Oryza sativa	3e-62	213	338	39.94
ATR_00156G00070	Amborella trichopoda	1e-61	211	320	37.50
OS05G41610	Oryza sativa	7e-61	209	340	37.94
ATR_00053G01260	Amborella trichopoda	1e-59	205	315	38.10
ATR_00053G01320	Amborella trichopoda	2e-59	204	308	37.34
OS01G71340	Oryza sativa	1e-58	203	318	39.94
AT4G16260	Arabidopsis thaliana	6e-58	201	323	37.77
AT5G20390	Arabidopsis thaliana	5e-56	196	342	34.50
ATR_00053G01270	Amborella trichopoda	4e-55	192	314	37.26
OS01G71400	Oryza sativa	4e-55	194	345	38.84
OS01G71410	Oryza sativa	5e-55	194	319	40.44
OS05G31140	Oryza sativa	5e-55	193	318	41.51
ATR_00107G00020	Amborella trichopoda	6e-55	192	309	37.22
OS01G51570	Oryza sativa	2e-54	192	322	38.20
AT5G20340	Arabidopsis thaliana	1e-53	190	357	33.61
ATR_00012G01430	Amborella trichopoda	3e-53	186	243	42.39
AT1G77780	Arabidopsis thaliana	5e-53	189	316	36.39
AT5G20330	Arabidopsis thaliana	7e-53	188	348	34.48
OS01G71930	Oryza sativa	5e-52	192	317	37.54
OS01G71474	Oryza sativa	2e-51	184	334	36.23
OS11G36940	Oryza sativa	5e-51	186	491	27.09
OS09G09980	Oryza sativa	7e-51	186	482	28.84
AT1G33220	Arabidopsis thaliana	7e-51	182	338	34.02
AT4G31140	Arabidopsis thaliana	2e-50	185	504	28.17
ATR_00053G01280	Amborella trichopoda	4e-50	179	313	35.78
OS07G32600	Oryza sativa	3e-49	182	335	36.12
AT3G57240	Arabidopsis thaliana	6e-49	177	325	34.46
OS07G07340	Oryza sativa	8e-49	180	481	27.65
OS06G39060	Oryza sativa	2e-48	179	481	27.03
ATR_00104G00300	Amborella trichopoda	3e-48	179	508	26.97
PP00162G00140	Physcomitrella patens	3e-48	179	480	28.75
OS08G23720	Oryza sativa	2e-47	177	498	28.31
OS03G18520	Oryza sativa	2e-47	176	483	28.57
ATR_00022G02030	Amborella trichopoda	4e-47	176	492	26.42
PP00054G00730	Physcomitrella patens	5e-47	176	492	28.66
AT3G24330	Arabidopsis thaliana	5e-47	176	502	27.69
AT1G77790	Arabidopsis thaliana	7e-47	172	346	33.24
PP00014G00160	Physcomitrella patens	2e-46	174	498	29.32
ATR_00131G00420	Amborella trichopoda	3e-46	174	501	26.75
OS03G27980	Oryza sativa	3e-46	173	492	29.07
AT3G55780	Arabidopsis thaliana	1e-45	170	335	30.75
PP00334G00230	Physcomitrella patens	1e-45	166	282	36.88
AT5G64790	Arabidopsis thaliana	1e-45	171	483	27.54
AT5G20560	Arabidopsis thaliana	2e-45	167	335	33.13
AT5G20870	Arabidopsis thaliana	2e-45	171	495	27.68
ATR_00013G01290	Amborella trichopoda	3e-45	166	325	32.62
OS01G71690	Oryza sativa	4e-45	173	326	37.73
ATR_00061G01310	Amborella trichopoda	4e-44	167	487	27.93
AT4G17180	Arabidopsis thaliana	6e-44	166	485	28.66
OS03G57880	Oryza sativa	1e-43	166	489	26.38
PP00027G01390	Physcomitrella patens	2e-42	162	483	29.40
ATR_00044G01260	Amborella trichopoda	2e-42	157	226	40.27
ATR_00004G00660	Amborella trichopoda	2e-42	162	485	26.39
AT5G18220	Arabidopsis thaliana	2e-42	162	499	25.45
AT5G58090	Arabidopsis thaliana	2e-42	162	483	27.74
AT1G64760	Arabidopsis thaliana	4e-42	161	485	27.01
OS03G45390	Oryza sativa	6e-42	161	493	27.59
ATR_00044G01250	Amborella trichopoda	6e-42	154	260	33.85
PP00447G00070	Physcomitrella patens	1e-41	155	264	36.74
PP00157G00080	Physcomitrella patens	1e-41	160	484	27.48
PP00197G00340	Physcomitrella patens	1e-41	160	493	27.59
ATR_00007G00030	Amborella trichopoda	2e-41	159	342	32.46
ATR_00025G03070	Amborella trichopoda	6e-41	158	490	27.55
OS08G12800	Oryza sativa	8e-41	158	483	28.99
AT5G58480	Arabidopsis thaliana	1e-40	157	488	27.05
OS02G04670	Oryza sativa	6e-40	155	486	25.93
OS05G45860	Oryza sativa	2e-36	144	430	27.91
AT2G19440	Arabidopsis thaliana	1e-35	142	331	29.31
AT3G04010	Arabidopsis thaliana	2e-35	142	353	27.20
ATR_00053G01290	Amborella trichopoda	9e-34	131	220	35.45
ES0128G00270	Ectocarpus siliculosus	2e-31	127	339	29.79
OS01G71650	Oryza sativa	3e-30	122	235	39.15
ATR_00156G00080	Amborella trichopoda	3e-27	114	296	30.74
ATR_03830G00010	Amborella trichopoda	5e-27	115	263	31.18
AT4G05430	Arabidopsis thaliana	8e-27	110	103	46.60
ATR_00092G00140	Amborella trichopoda	3e-26	109	99	51.52
ATR_00013G01360	Amborella trichopoda	2e-24	103	134	43.28
ATR_00028G00630	Amborella trichopoda	1e-23	100	87	49.43
AT2G30933	Arabidopsis thaliana	2e-22	100	112	48.21
OS02G53200	Oryza sativa	3e-22	103	88	51.14
AT5G67460	Arabidopsis thaliana	1e-21	100	153	33.99
ATR_00164G00170	Amborella trichopoda	1e-21	101	85	50.59
ATR_00086G00620	Amborella trichopoda	3e-21	97.1	87	52.87
ATR_00002G00460	Amborella trichopoda	5e-21	98.2	89	50.56
ATR_00028G00620	Amborella trichopoda	6e-21	93.2	93	40.86
ATR_00013G02250	Amborella trichopoda	1e-20	94.4	88	46.59
OS02G29980	Oryza sativa	2e-20	94.0	86	50.00
AT1G66855	Arabidopsis thaliana	9e-20	89.7	90	45.56
OS10G20650	Oryza sativa	2e-19	93.2	128	40.62
OS03G61780	Oryza sativa	4e-19	94.7	96	47.92
ATR_00045G00710	Amborella trichopoda	4e-19	94.7	88	48.86
OS01G14140	Oryza sativa	9e-19	87.4	87	48.28
AT1G79480	Arabidopsis thaliana	1e-18	92.0	91	45.05
AT1G29380	Arabidopsis thaliana	1e-18	90.9	86	51.16
Naga_100464g2	Nannochloropsis gaditana	1e-18	91.3	339	27.14
AT5G35740	Arabidopsis thaliana	2e-18	86.3	93	39.78
AT1G66870	Arabidopsis thaliana	2e-18	85.9	89	41.57
OS05G50490	Oryza sativa	6e-18	88.2	86	50.00
AT4G13600	Arabidopsis thaliana	7e-18	87.0	85	44.71
PP00012G01450	Physcomitrella patens	2e-17	85.1	89	44.94
OS03G30830	Oryza sativa	7e-17	83.6	85	44.71
OS07G40940	Oryza sativa	1e-16	82.8	93	40.86
OS01G44090	Oryza sativa	1e-16	84.0	87	49.43
AT2G43670	Arabidopsis thaliana	1e-16	80.9	85	37.65
AT1G09460	Arabidopsis thaliana	2e-16	84.0	88	46.59
AT2G04910	Arabidopsis thaliana	2e-16	80.5	79	45.57
OS03G25790	Oryza sativa	2e-16	85.5	85	47.06
ATR_00217G00090	Amborella trichopoda	7e-16	79.0	87	43.68
AT1G66852	Arabidopsis thaliana	9e-16	78.6	89	40.45
AT5G53600	Arabidopsis thaliana	2e-15	77.8	87	42.53
AT1G18650	Arabidopsis thaliana	2e-15	79.3	86	45.35
OS03G40330	Oryza sativa	2e-15	79.7	83	49.40
emh707260	Emiliania huxleyi	2e-15	82.4	361	26.04
emh134840	Emiliania huxleyi	2e-15	82.4	361	26.04
PP00301G00080	Physcomitrella patens	2e-15	79.3	89	42.70
ATR_00110G01170	Amborella trichopoda	3e-15	77.0	85	42.35
OS07G43940	Oryza sativa	3e-15	79.3	106	40.57
ATR_00021G01160	Amborella trichopoda	3e-15	78.2	81	43.21
AT4G09462	Arabidopsis thaliana	4e-15	76.6	88	40.91
OS03G54910	Oryza sativa	7e-15	77.4	85	38.82
AT5G61130	Arabidopsis thaliana	1e-14	77.4	86	40.70
AT4G09464	Arabidopsis thaliana	1e-14	75.1	88	39.77
AT4G09467	Arabidopsis thaliana	1e-14	75.1	88	39.77
AT4G09465	Arabidopsis thaliana	1e-14	75.1	88	39.77
AT1G78520	Arabidopsis thaliana	2e-14	75.1	95	37.89
OS08G04140	Oryza sativa	2e-14	75.1	96	42.71
AT4G09090	Arabidopsis thaliana	2e-14	74.7	85	41.18
OS06G45450	Oryza sativa	3e-14	76.3	128	38.28
AT5G63250	Arabidopsis thaliana	3e-14	74.7	87	39.08
AT4G16165	Arabidopsis thaliana	7e-14	73.2	89	38.20
AT5G63240	Arabidopsis thaliana	1e-13	72.8	109	34.86
AT2G43660	Arabidopsis thaliana	2e-13	72.4	93	37.63
AT5G53610	Arabidopsis thaliana	4e-13	70.9	86	45.35
OS06G34660	Oryza sativa	7e-13	71.6	91	41.76
AT4G09466	Arabidopsis thaliana	8e-13	70.1	88	37.50
AT3G58100	Arabidopsis thaliana	8e-13	71.2	89	39.33
PP00132G00380	Physcomitrella patens	8e-13	71.6	103	36.89
OS01G55820	Oryza sativa	2e-12	70.9	86	39.53
AT5G63225	Arabidopsis thaliana	3e-12	68.2	87	40.23
AT2G03505	Arabidopsis thaliana	4e-12	69.3	88	38.64
emh285340	Emiliania huxleyi	4e-12	71.2	314	26.43
emh538120	Emiliania huxleyi	5e-12	71.2	314	26.43
PP00325G00040	Physcomitrella patens	5e-12	70.9	89	37.08
AT5G08000	Arabidopsis thaliana	1e-11	68.2	86	39.53
AT5G63230	Arabidopsis thaliana	2e-11	66.2	87	36.78
AT1G69295	Arabidopsis thaliana	5e-11	66.6	81	44.44
OS03G56130	Oryza sativa	5e-11	68.6	181	29.28
AT3G28250	Arabidopsis thaliana	6e-11	64.7	79	39.24
OS05G43690	Oryza sativa	1e-10	65.1	106	35.85
OS03G22530	Oryza sativa	4e-10	62.8	101	34.65
AT1G26450	Arabidopsis thaliana	4e-10	63.2	72	44.44
ATR_00095G01020	Amborella trichopoda	7e-09	58.2	78	42.31
OS07G41014	Oryza sativa	1e-08	62.0	181	30.94
AA0001G04770	Aureococcus anophagefferens	4e-08	56.2	88	32.95
AT2G42930	Arabidopsis thaliana	1e-07	55.1	79	36.71
ATR_00104G00310	Amborella trichopoda	3e-06	51.6	143	26.57

External Sequences (optional)

External Sequences Type

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MSA algorithm
Tree construction algorithm
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