Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OT_17G00830	Ostreococcus tauri	0.0	1100	528	100.00
OM_17G00960	Ostreococcus mediterraneus	0.0	789	533	69.98
OL16G00900	Ostreococcus lucimarinus	0.0	783	509	72.30
ORCC809_16G01780	Ostreococcus sp RCC809	0.0	722	509	66.80
MRCC299_10G04230	Micromonas sp RCC299	0.0	596	492	58.13
MP16G01280	Micromonas pusilla strain CCMP1545	0.0	582	487	58.32
BPRRCC1105_06G01240	Bathycoccus prasinos	0.0	579	525	55.05
CV00G12800	Coccomyxa subellipsoidea C-169	1e-154	461	501	46.51
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	3e-153	456	501	46.31
PI00G51280	Picochlorum sp. SENEW3 (SE3)	7e-151	453	501	47.11
RCC4223.04g03450	Picochlorum_RCC4223	1e-148	448	508	46.46
AP00G21430	Auxenochlorella protothecoides	2e-148	447	518	46.91
CV00G12810	Coccomyxa subellipsoidea C-169	9e-140	418	444	49.55
HE0000G41170	Helicosporidium sp.	1e-136	416	501	45.31
PP00065G00990	Physcomitrella patens	3e-128	392	504	37.50
PP00036G00370	Physcomitrella patens	8e-127	388	504	37.50
PP00036G01070	Physcomitrella patens	9e-127	388	517	37.52
ATR_00065G00270	Amborella trichopoda	2e-121	380	473	41.44
AT5G03760	Arabidopsis thaliana	2e-119	369	518	37.45
AT3G28180	Arabidopsis thaliana	4e-119	373	427	42.62
AT2G35650	Arabidopsis thaliana	2e-117	365	503	36.98
ATR_00040G02570	Amborella trichopoda	2e-117	364	507	36.88
PP00373G00150	Physcomitrella patens	2e-117	369	454	40.97
AT5G22740	Arabidopsis thaliana	2e-117	363	504	37.70
OS06G42020	Oryza sativa	4e-117	363	519	36.42
PP00019G01110	Physcomitrella patens	6e-117	368	427	42.15
AT4G31590	Arabidopsis thaliana	1e-116	367	429	42.42
PP00224G00220	Physcomitrella patens	4e-116	365	447	40.49
CNC64A_025G01180	Chlorella sp NC64A	9e-116	363	501	40.72
AT1G23480	Arabidopsis thaliana	1e-115	360	509	36.74
ATR_00019G01680	Amborella trichopoda	3e-115	363	433	41.57
OS07G03260	Oryza sativa	3e-115	363	446	42.60
PP00162G00740	Physcomitrella patens	3e-115	363	427	42.39
OS07G43710	Oryza sativa	4e-114	357	513	36.06
AT4G07960	Arabidopsis thaliana	1e-113	359	434	43.09
AT2G24630	Arabidopsis thaliana	1e-113	358	429	41.26
PP00089G01080	Physcomitrella patens	6e-113	357	429	41.72
OS03G26044	Oryza sativa	7e-113	353	525	37.14
OS03G56060	Oryza sativa	1e-112	349	362	46.41
OS09G25900	Oryza sativa	5e-112	355	433	42.49
OS08G15420	Oryza sativa	6e-112	356	431	41.76
AT1G24070	Arabidopsis thaliana	6e-111	347	517	34.62
ATR_00013G02120	Amborella trichopoda	1e-110	350	432	41.90
PP00015G00680	Physcomitrella patens	3e-110	350	431	40.84
OS01G56130	Oryza sativa	7e-110	349	455	41.54
AT3G07330	Arabidopsis thaliana	2e-109	348	433	40.18
OS02G09930	Oryza sativa	3e-109	342	515	36.12
OS08G33740	Oryza sativa	3e-109	345	474	37.13
PP00164G00010	Physcomitrella patens	2e-108	345	428	41.36
OS05G43530	Oryza sativa	2e-108	345	438	42.01
OS02G51060	Oryza sativa	3e-108	340	507	36.69
AT4G13410	Arabidopsis thaliana	2e-107	338	511	34.64
OS03G07350	Oryza sativa	4e-107	338	445	36.85
OS10G26630	Oryza sativa	7e-102	323	374	41.18
AT3G56000	Arabidopsis thaliana	1e-101	323	511	34.05
AT5G16190	Arabidopsis thaliana	4e-101	318	451	37.47
AT4G16590	Arabidopsis thaliana	5e-99	311	399	38.60
OS06G12460	Oryza sativa	5e-89	292	385	38.18
ATR_00072G01360	Amborella trichopoda	2e-88	282	313	42.81
VC00G68920	Volvox carteri	1e-80	269	433	35.80
CR06G04470	Chlamydomonas reinhardtii	4e-80	270	367	39.24
OS09G26770	Oryza sativa	2e-50	186	310	32.90
emh181270	Emiliania huxleyi	1e-40	154	245	38.37
emh488170	Emiliania huxleyi	1e-40	154	245	38.37
OM_13G00450	Ostreococcus mediterraneus	8e-21	100	244	28.28
ORCC809_20G02860	Ostreococcus sp RCC809	4e-20	98.2	351	27.35
OL20G02910	Ostreococcus lucimarinus	5e-20	98.2	244	29.92
OT_14G02980	Ostreococcus tauri	7e-17	88.2	278	27.34
ES0097G00210	Ectocarpus siliculosus	2e-11	71.2	300	25.67
ES0097G00300	Ectocarpus siliculosus	2e-11	70.9	332	24.40
PI00G46760	Picochlorum sp. SENEW3 (SE3)	2e-10	67.8	396	21.97
CV00G28250	Coccomyxa subellipsoidea C-169	3e-10	67.4	322	21.74
PP00372G00370	Physcomitrella patens	8e-10	65.5	243	25.10
CV00G01670	Coccomyxa subellipsoidea C-169	1e-09	65.5	318	23.27
CV00G13860	Coccomyxa subellipsoidea C-169	1e-09	65.5	322	22.36
RCC4223.10g01020	Picochlorum_RCC4223	1e-09	65.5	367	22.62
emh647580	Emiliania huxleyi	1e-09	64.7	283	22.61
AP00G07320	Auxenochlorella protothecoides	2e-09	64.7	417	22.78
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	2e-09	64.3	242	23.14
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	4e-09	63.2	214	24.77
ES0200G00060	Ectocarpus siliculosus	6e-09	62.8	295	26.44
PI00G60790	Picochlorum sp. SENEW3 (SE3)	2e-08	61.6	334	21.86
CV00G83580	Coccomyxa subellipsoidea C-169	2e-08	61.2	252	22.62
ES0185G00090	Ectocarpus siliculosus	4e-07	57.0	351	21.94
AC00G54710	Asterochloris sp. Cgr-DA1pho v2.0	5e-07	57.0	290	21.03
AC00G02440	Asterochloris sp. Cgr-DA1pho v2.0	4e-06	53.9	150	24.00

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment