Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS10G35460	Oryza sativa	0.0	889	426	100.00
OS05G32110	Oryza sativa	0.0	598	404	69.80
OS07G41310	Oryza sativa	0.0	538	412	61.41
AT5G60920	Arabidopsis thaliana	0.0	530	417	60.43
OS03G30260	Oryza sativa	3e-180	518	409	59.66
AT3G02210	Arabidopsis thaliana	2e-177	511	404	59.65
ATR_00047G01560	Amborella trichopoda	3e-174	501	379	63.85
AT3G29810	Arabidopsis thaliana	9e-173	498	395	59.24
AT5G15630	Arabidopsis thaliana	2e-161	469	398	56.53
OS03G30250	Oryza sativa	4e-157	459	438	51.37
OS07G41320	Oryza sativa	3e-154	452	430	53.02
ATR_00047G01550	Amborella trichopoda	1e-142	421	369	53.93
PP00044G00600	Physcomitrella patens	2e-140	417	437	48.28
ATR_00047G01570	Amborella trichopoda	3e-140	413	369	55.28
PP00246G00290	Physcomitrella patens	7e-139	412	425	48.47
PP00084G00590	Physcomitrella patens	3e-132	395	438	46.80
OS03G54750	Oryza sativa	2e-126	374	238	72.69
ATR_00008G00280	Amborella trichopoda	2e-124	373	370	49.46
AT1G09790	Arabidopsis thaliana	5e-117	356	396	44.70
ATR_00041G02630	Amborella trichopoda	1e-111	343	399	44.36
AT5G60950	Arabidopsis thaliana	2e-58	196	207	48.31
OS04G45700	Oryza sativa	1e-38	148	220	37.27
OS03G18910	Oryza sativa	3e-35	142	458	27.95
PP00195G00280	Physcomitrella patens	3e-34	139	425	27.06
AT4G16120	Arabidopsis thaliana	4e-34	138	431	27.61
OS07G49080	Oryza sativa	5e-34	138	417	27.58
ATR_00057G00890	Amborella trichopoda	4e-33	135	419	27.21
ATR_00066G02280	Amborella trichopoda	5e-33	135	421	28.03
PP00277G00440	Physcomitrella patens	6e-33	134	425	26.59
ATR_00232G00020	Amborella trichopoda	2e-31	123	125	47.20
PP00036G01190	Physcomitrella patens	1e-30	128	432	28.01
PP00054G01730	Physcomitrella patens	4e-30	126	434	26.96
AT5G49270	Arabidopsis thaliana	8e-30	125	429	24.71
ATR_00232G00030	Amborella trichopoda	6e-29	117	146	39.73
PP00233G00430	Physcomitrella patens	9e-29	123	441	25.40
PP00263G00520	Physcomitrella patens	3e-28	121	440	26.59
AT4G27110	Arabidopsis thaliana	5e-27	117	425	27.29
PP00281G00440	Physcomitrella patens	1e-25	113	434	27.88
AT3G20580	Arabidopsis thaliana	2e-25	112	424	25.71
PP00021G00090	Physcomitrella patens	4e-25	111	424	26.89
OS06G47110	Oryza sativa	6e-25	111	427	25.06
AT3G16860	Arabidopsis thaliana	8e-24	107	432	25.93

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment