Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS10G26630	Oryza sativa	0.0	1097	530	100.00
OS03G07350	Oryza sativa	0.0	846	524	78.05
ATR_00040G02570	Amborella trichopoda	0.0	658	514	60.31
AT5G03760	Arabidopsis thaliana	0.0	657	511	58.90
OS06G42020	Oryza sativa	0.0	646	532	57.89
AT5G22740	Arabidopsis thaliana	0.0	623	512	55.66
OS07G43710	Oryza sativa	0.0	623	515	56.89
OS03G26044	Oryza sativa	0.0	619	522	57.85
OS02G09930	Oryza sativa	0.0	615	528	55.49
AT1G23480	Arabidopsis thaliana	0.0	611	510	56.27
AT4G13410	Arabidopsis thaliana	0.0	597	503	54.27
OS08G33740	Oryza sativa	0.0	597	538	52.60
PP00065G00990	Physcomitrella patens	0.0	593	544	52.39
OS06G12460	Oryza sativa	0.0	594	500	56.60
PP00036G01070	Physcomitrella patens	0.0	590	525	53.33
AT1G24070	Arabidopsis thaliana	0.0	589	518	54.05
PP00036G00370	Physcomitrella patens	0.0	587	524	53.24
AT2G35650	Arabidopsis thaliana	0.0	587	501	54.89
OS02G51060	Oryza sativa	0.0	572	518	53.67
AT5G16190	Arabidopsis thaliana	0.0	565	441	60.54
AT3G56000	Arabidopsis thaliana	0.0	553	511	52.64
AT4G16590	Arabidopsis thaliana	5e-170	494	398	56.28
ATR_00072G01360	Amborella trichopoda	2e-160	466	318	65.72
OS09G26770	Oryza sativa	1e-154	458	354	65.54
PP00224G00220	Physcomitrella patens	3e-134	412	569	39.02
PP00089G01080	Physcomitrella patens	2e-130	402	562	38.43
PP00162G00740	Physcomitrella patens	4e-130	402	501	42.71
PP00015G00680	Physcomitrella patens	3e-129	400	444	43.92
AT3G28180	Arabidopsis thaliana	1e-126	392	378	48.68
PP00373G00150	Physcomitrella patens	1e-125	390	548	39.23
PP00164G00010	Physcomitrella patens	2e-125	390	465	43.01
PP00019G01110	Physcomitrella patens	3e-125	389	496	41.13
AT4G31590	Arabidopsis thaliana	1e-123	385	473	41.44
AT2G24630	Arabidopsis thaliana	2e-123	384	377	46.42
AT3G07330	Arabidopsis thaliana	2e-122	382	552	37.32
OS09G25900	Oryza sativa	1e-121	380	376	47.07
OS07G03260	Oryza sativa	4e-121	378	465	41.72
ATR_00019G01680	Amborella trichopoda	7e-121	378	386	46.63
OS01G56130	Oryza sativa	2e-120	377	475	41.89
OS08G15420	Oryza sativa	8e-120	377	405	44.20
OS05G43530	Oryza sativa	9e-120	375	481	40.96
MP16G01280	Micromonas pusilla strain CCMP1545	1e-119	368	486	41.15
OS03G56060	Oryza sativa	8e-119	365	461	41.00
ATR_00065G00270	Amborella trichopoda	2e-117	369	389	44.99
AT4G07960	Arabidopsis thaliana	3e-117	369	466	41.63
MRCC299_10G04230	Micromonas sp RCC299	3e-116	359	467	39.83
PI00G51280	Picochlorum sp. SENEW3 (SE3)	2e-112	354	444	41.67
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	1e-111	349	452	40.27
BPRRCC1105_06G01240	Bathycoccus prasinos	2e-111	351	445	39.78
CV00G12800	Coccomyxa subellipsoidea C-169	1e-110	347	500	38.00
ATR_00013G02120	Amborella trichopoda	2e-110	349	451	40.58
AP00G21430	Auxenochlorella protothecoides	5e-108	342	406	41.38
OM_17G00960	Ostreococcus mediterraneus	1e-107	340	442	38.01
RCC4223.04g03450	Picochlorum_RCC4223	3e-107	341	452	39.82
OT_17G00830	Ostreococcus tauri	4e-107	337	526	35.17
CV00G12810	Coccomyxa subellipsoidea C-169	3e-105	329	411	41.61
HE0000G41170	Helicosporidium sp.	1e-103	331	444	38.96
OL16G00900	Ostreococcus lucimarinus	3e-103	327	448	39.51
ORCC809_16G01780	Ostreococcus sp RCC809	6e-102	325	441	39.46
CNC64A_025G01180	Chlorella sp NC64A	9e-93	303	446	36.77
VC00G68920	Volvox carteri	8e-70	240	443	32.51
CR06G04470	Chlamydomonas reinhardtii	1e-68	238	437	34.55
emh181270	Emiliania huxleyi	2e-53	190	275	41.45
emh488170	Emiliania huxleyi	2e-53	190	275	41.45
ORCC809_20G02860	Ostreococcus sp RCC809	6e-30	128	273	32.60
OL20G02910	Ostreococcus lucimarinus	2e-29	127	269	32.71
OM_13G00450	Ostreococcus mediterraneus	9e-28	122	276	31.16
OT_14G02980	Ostreococcus tauri	6e-26	116	260	31.15
emh647580	Emiliania huxleyi	8e-15	81.3	434	23.73
ES0097G00300	Ectocarpus siliculosus	2e-12	74.3	211	27.96
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	2e-11	70.5	307	27.04
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	3e-11	70.1	279	25.81
ES0097G00210	Ectocarpus siliculosus	3e-11	70.1	207	28.50
ES0200G00060	Ectocarpus siliculosus	6e-11	69.3	273	27.47
RCC4223.10g01020	Picochlorum_RCC4223	7e-11	69.3	324	26.85
CV00G83580	Coccomyxa subellipsoidea C-169	1e-10	68.2	261	27.59
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	2e-10	67.4	336	24.40
Naga_100079g22	Nannochloropsis gaditana	7e-10	65.5	270	24.81
PP00372G00370	Physcomitrella patens	1e-09	64.7	274	23.36
PI00G46760	Picochlorum sp. SENEW3 (SE3)	2e-09	64.7	324	25.93
PI00G60790	Picochlorum sp. SENEW3 (SE3)	3e-09	63.9	290	22.76
AC00G54710	Asterochloris sp. Cgr-DA1pho v2.0	2e-08	61.6	346	24.86
PP00435G00020	Physcomitrella patens	2e-08	57.4	83	33.73
AP00G07320	Auxenochlorella protothecoides	8e-08	59.3	271	25.83
CV00G13860	Coccomyxa subellipsoidea C-169	2e-07	57.8	364	22.80
CV00G40830	Coccomyxa subellipsoidea C-169	6e-07	56.6	248	24.19
CV00G28250	Coccomyxa subellipsoidea C-169	6e-07	56.6	356	23.03
ES0185G00090	Ectocarpus siliculosus	1e-06	55.5	270	24.81
ES0097G00120	Ectocarpus siliculosus	3e-06	53.9	129	32.56
AC00G21740	Asterochloris sp. Cgr-DA1pho v2.0	6e-06	53.1	371	23.18
ccr13740	Chondrus crispus	6e-06	53.1	283	22.97

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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