Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS08G10520	Oryza sativa	1e-99	289	140	100.00
OS08G26890	Oryza sativa	1e-97	284	140	97.86
OS08G25990	Oryza sativa	2e-39	135	67	92.54
OS02G40840	Oryza sativa	5e-29	116	65	78.46
OS10G33540	Oryza sativa	1e-25	105	63	71.43
OS10G33460	Oryza sativa	7e-25	104	65	69.23
OS10G33520	Oryza sativa	3e-24	102	63	68.25
AT4G28570	Arabidopsis thaliana	5e-23	99.4	67	61.19
AT1G03990	Arabidopsis thaliana	8e-23	98.6	67	61.19
PP00058G00330	Physcomitrella patens	2e-19	89.0	67	53.73
AT3G23410	Arabidopsis thaliana	5e-19	87.8	63	57.14
ATR_00067G00900	Amborella trichopoda	3e-18	85.5	64	54.69
ATR_00011G01930	Amborella trichopoda	2e-17	83.2	68	51.47
PP00007G01140	Physcomitrella patens	2e-17	83.2	62	54.84
AT4G19380	Arabidopsis thaliana	1e-15	77.8	62	51.61
PP00048G00830	Physcomitrella patens	2e-15	77.4	67	52.24
CV00G74240	Coccomyxa subellipsoidea C-169	1e-14	74.7	65	46.15
AA0016G00990	Aureococcus anophagefferens	3e-14	68.2	63	49.21
Naga_100019g14	Nannochloropsis gaditana	2e-13	71.6	59	49.15
DDB_G0292042	Dictyostelium discoideum	5e-13	70.1	58	44.83
CV00G88480	Coccomyxa subellipsoidea C-169	5e-13	69.7	59	49.15
ES0067G00040	Ectocarpus siliculosus	1e-12	69.3	62	48.39
AC00G86800	Asterochloris sp. Cgr-DA1pho v2.0	2e-12	68.6	59	45.76
AP00G22820	Auxenochlorella protothecoides	1e-10	63.2	60	48.33
PTI_16G02280	Phaeodactylum tricornutum	3e-10	61.6	59	44.07

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment