Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS07G47620	Oryza sativa	8e-121	345	172	100.00
AT2G47710	Arabidopsis thaliana	1e-61	194	158	62.66
OS12G36640	Oryza sativa	2e-57	184	160	59.38
ATR_00045G03170	Amborella trichopoda	2e-54	176	157	56.69
ATR_00016G03410	Amborella trichopoda	6e-52	170	155	54.84
OS12G36630	Oryza sativa	2e-50	166	154	53.90
ATR_00079G00520	Amborella trichopoda	6e-36	128	161	39.75
OS10G30150	Oryza sativa	3e-33	122	169	45.56
AT3G11930	Arabidopsis thaliana	6e-30	114	188	34.57
AT1G09740	Arabidopsis thaliana	1e-29	112	164	40.85
ATR_00003G00120	Amborella trichopoda	2e-29	112	155	40.65
OS01G19820	Oryza sativa	8e-28	108	158	42.41
AT3G58450	Arabidopsis thaliana	4e-27	107	160	37.50
OS03G53900	Oryza sativa	5e-26	103	163	41.10
OS03G22390	Oryza sativa	1e-25	102	151	47.02
OS05G28740	Oryza sativa	2e-24	99.0	157	40.13
OS02G52314	Oryza sativa	8e-24	97.1	156	33.97
OS01G32780	Oryza sativa	4e-23	95.5	157	33.76
AT1G68300	Arabidopsis thaliana	1e-21	91.3	159	32.08
ATR_00003G00130	Amborella trichopoda	2e-20	86.3	86	52.33
AT5G49050	Arabidopsis thaliana	2e-19	85.5	112	41.96
OS03G19270	Oryza sativa	2e-19	86.3	176	34.09
AT3G62550	Arabidopsis thaliana	1e-18	83.2	157	36.94
ATR_00135G00050	Amborella trichopoda	1e-18	83.6	148	35.14
ATR_00105G00370	Amborella trichopoda	2e-14	71.2	127	30.71
PP00336G00330	Physcomitrella patens	2e-14	73.6	156	33.33
AT1G11360	Arabidopsis thaliana	6e-14	70.9	174	32.76
PP00171G00550	Physcomitrella patens	1e-13	70.1	164	29.27
ATR_00165G00230	Amborella trichopoda	1e-13	68.9	166	30.72
PP00007G02290	Physcomitrella patens	2e-13	68.9	174	28.74
PP00098G01150	Physcomitrella patens	5e-13	68.2	173	29.48
ATR_00045G01790	Amborella trichopoda	2e-12	65.5	163	30.06
OS05G06500	Oryza sativa	2e-11	63.2	153	28.10
OS02G47840	Oryza sativa	3e-11	62.4	173	26.59
OS02G53320	Oryza sativa	4e-11	62.0	161	26.09
PP00034G01480	Physcomitrella patens	5e-11	65.1	178	28.09
PP00001G01620	Physcomitrella patens	5e-11	61.6	161	29.81
ATR_00058G02030	Amborella trichopoda	6e-11	61.6	166	25.90
AT5G14680	Arabidopsis thaliana	2e-10	60.1	170	24.71
CR16G01750	Chlamydomonas reinhardtii	2e-10	59.7	157	28.03
AT3G01520	Arabidopsis thaliana	5e-10	58.9	54	42.59
VC00G96740	Volvox carteri	8e-10	58.2	164	26.22
MP03G02550	Micromonas pusilla strain CCMP1545	8e-10	58.9	168	26.19
CR12G16810	Chlamydomonas reinhardtii	1e-09	57.8	156	30.77
OS05G07810	Oryza sativa	1e-09	58.2	170	33.53
OS01G63010	Oryza sativa	1e-09	57.8	160	27.50
PP00062G00920	Physcomitrella patens	2e-09	57.4	164	26.22
PP00400G00060	Physcomitrella patens	4e-09	56.2	163	23.31
AT3G53990	Arabidopsis thaliana	4e-09	56.2	158	25.32
CNC64A_010G02620	Chlorella sp NC64A	6e-09	55.8	165	32.73
PP00447G00080	Physcomitrella patens	8e-09	56.2	57	43.86
PP00304G00100	Physcomitrella patens	8e-09	56.2	54	40.74
ATR_00085G00590	Amborella trichopoda	2e-08	54.3	79	37.97
OS01G07590	Oryza sativa	1e-07	53.9	156	28.21
AC00G12530	Asterochloris sp. Cgr-DA1pho v2.0	1e-07	51.6	142	27.46
AT3G17020	Arabidopsis thaliana	5e-07	50.4	84	33.33
PI00G60170	Picochlorum sp. SENEW3 (SE3)	5e-07	52.0	179	29.05
CNC64A_001G00510	Chlorella sp NC64A	8e-07	51.6	160	27.50
CNC64A_020G01020	Chlorella sp NC64A	9e-07	51.2	169	25.44
ATR_00072G00070	Amborella trichopoda	2e-06	49.7	168	27.98
RCC4223.02g05790	Picochlorum_RCC4223	2e-06	48.9	155	27.10
PI00G38850	Picochlorum sp. SENEW3 (SE3)	2e-06	48.9	157	27.39
CV00G47340	Coccomyxa subellipsoidea C-169	3e-06	48.1	156	26.28
ATR_00024G00890	Amborella trichopoda	9e-06	47.0	140	26.43

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment