Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS07G41310	Oryza sativa	0.0	929	447	100.00
OS03G30260	Oryza sativa	0.0	713	423	76.36
OS05G32110	Oryza sativa	0.0	690	426	74.18
AT5G60920	Arabidopsis thaliana	0.0	681	424	73.58
AT3G02210	Arabidopsis thaliana	0.0	677	422	72.51
AT3G29810	Arabidopsis thaliana	0.0	663	445	69.21
ATR_00047G01560	Amborella trichopoda	0.0	651	405	73.33
AT5G15630	Arabidopsis thaliana	0.0	602	418	65.07
OS03G30250	Oryza sativa	0.0	571	441	61.45
OS07G41320	Oryza sativa	0.0	569	453	58.28
ATR_00047G01550	Amborella trichopoda	0.0	552	368	67.66
PP00246G00290	Physcomitrella patens	0.0	540	447	57.49
OS10G35460	Oryza sativa	0.0	533	395	63.04
ATR_00047G01570	Amborella trichopoda	8e-179	512	370	62.97
PP00044G00600	Physcomitrella patens	3e-177	511	443	52.60
PP00084G00590	Physcomitrella patens	6e-169	490	435	55.17
ATR_00008G00280	Amborella trichopoda	3e-155	453	370	56.49
AT1G09790	Arabidopsis thaliana	3e-148	437	400	54.00
ATR_00041G02630	Amborella trichopoda	1e-145	430	409	51.10
OS03G54750	Oryza sativa	3e-140	410	234	79.91
AT5G60950	Arabidopsis thaliana	4e-67	219	206	54.37
OS04G45700	Oryza sativa	5e-66	222	207	51.21
ATR_00232G00030	Amborella trichopoda	2e-54	186	153	55.56
ATR_00066G02280	Amborella trichopoda	3e-40	157	454	28.41
OS03G18910	Oryza sativa	1e-39	154	417	28.06
ATR_00232G00020	Amborella trichopoda	7e-39	144	126	50.79
PP00263G00520	Physcomitrella patens	9e-38	150	453	28.92
PP00036G01190	Physcomitrella patens	1e-37	149	451	28.16
AT5G49270	Arabidopsis thaliana	2e-36	145	456	25.22
PP00277G00440	Physcomitrella patens	3e-36	144	442	28.05
AT4G16120	Arabidopsis thaliana	7e-36	144	425	26.59
PP00195G00280	Physcomitrella patens	9e-36	144	449	26.06
OS07G49080	Oryza sativa	1e-35	144	422	27.96
PP00233G00430	Physcomitrella patens	7e-35	141	452	29.42
PP00054G01730	Physcomitrella patens	5e-34	138	461	27.55
PP00281G00440	Physcomitrella patens	5e-33	136	415	28.67
AT4G27110	Arabidopsis thaliana	2e-32	134	458	28.82
PP00021G00090	Physcomitrella patens	4e-31	130	415	28.43
ATR_00057G00890	Amborella trichopoda	6e-31	129	418	27.99
OS06G47110	Oryza sativa	3e-29	124	419	26.49
AT3G16860	Arabidopsis thaliana	4e-29	124	463	26.13
AT3G20580	Arabidopsis thaliana	1e-28	122	462	27.92

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment