Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G51290	Oryza sativa	0.0	868	421	100.00
AT5G17230	Arabidopsis thaliana	0.0	556	372	72.31
ATR_00032G00920	Amborella trichopoda	0.0	536	348	75.00
PP00196G00610	Physcomitrella patens	0.0	521	344	72.67
ATR_00044G00140	Amborella trichopoda	4e-180	515	342	72.51
PP00134G00210	Physcomitrella patens	5e-177	509	344	70.06
OS12G43130	Oryza sativa	8e-177	507	327	74.92
PP00323G00260	Physcomitrella patens	8e-176	506	346	70.23
OS09G38320	Oryza sativa	1e-173	500	335	71.94
CR02G05480	Chlamydomonas reinhardtii	6e-135	399	305	62.62
VC00G37110	Volvox carteri	2e-134	399	305	62.95
CNC64A_026G00990	Chlorella sp NC64A	2e-133	396	293	66.21
PI00G50760	Picochlorum sp. SENEW3 (SE3)	7e-133	395	288	65.97
RCC4223.05g04940	Picochlorum_RCC4223	1e-132	395	305	63.28
AC00G00440	Asterochloris sp. Cgr-DA1pho v2.0	3e-132	394	394	51.78
CV00G33440	Coccomyxa subellipsoidea C-169	1e-131	390	306	62.42
OM_03G03630	Ostreococcus mediterraneus	2e-131	390	360	55.28
BPRRCC1105_03G04230	Bathycoccus prasinos	1e-130	390	339	55.75
OT_05G03610	Ostreococcus tauri	1e-128	384	334	57.49
MP03G03960	Micromonas pusilla strain CCMP1545	9e-128	383	352	54.55
MRCC299_10G03230	Micromonas sp RCC299	1e-127	380	298	61.41
AC00G00450	Asterochloris sp. Cgr-DA1pho v2.0	4e-120	363	403	48.64
OL05G03400	Ostreococcus lucimarinus	5e-115	345	264	61.74
ORCC809_05G03340	Ostreococcus sp RCC809	3e-114	342	264	60.98
CM13G01660	Cyanidioschyzon merolae	9e-99	312	284	52.82
gsu65500	Galdieria sulphuraria	1e-94	298	288	50.00
ES0244G00350	Ectocarpus siliculosus	2e-90	290	303	49.17
Naga_100052g15	Nannochloropsis gaditana	6e-90	290	286	52.10
ATR_00133G00500	Amborella trichopoda	3e-89	276	188	68.09
PTI_05G01930	Phaeodactylum tricornutum	8e-84	272	325	48.31
TP05G05130	Thalassiosira pseudonana	6e-81	260	296	49.66
AA0019G00340	Aureococcus anophagefferens	9e-81	260	311	45.02
FC023G01500	Fragilariopsis cylindrus	2e-80	260	297	46.80
AP00G19640	Auxenochlorella protothecoides	2e-64	221	188	59.57
MRCC299_13G02880	Micromonas sp RCC299	8e-61	207	308	41.88
MP15G01270	Micromonas pusilla strain CCMP1545	3e-48	175	314	37.26
OM_12G03680	Ostreococcus mediterraneus	4e-48	176	301	36.88
OL10G00050	Ostreococcus lucimarinus	3e-45	164	277	37.18
ORCC809_01G04410	Ostreococcus sp RCC809	6e-45	165	285	37.54
emh167890	Emiliania huxleyi	2e-44	162	233	41.63
AA0008G02820	Aureococcus anophagefferens	1e-42	155	235	40.43
OT_13G03120	Ostreococcus tauri	3e-42	159	288	38.54
emh434140	Emiliania huxleyi	1e-37	142	186	43.55
emh643360	Emiliania huxleyi	1e-26	110	100	48.00
ATR_00133G00510	Amborella trichopoda	2e-14	74.3	76	50.00
RCC4223.104g00160	Picochlorum_RCC4223	4e-11	67.0	248	23.39
CV00G58580	Coccomyxa subellipsoidea C-169	1e-07	57.0	279	21.51
CM07G01780	Cyanidioschyzon merolae	3e-06	53.1	229	26.20
VC00G125920	Volvox carteri	9e-06	51.6	215	26.05

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment