Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G44540	Oryza sativa	0.0	1193	593	100.00
AT1G73050	Arabidopsis thaliana	0.0	547	555	52.07
ATR_00025G03910	Amborella trichopoda	3e-176	518	544	51.84
ATR_00069G01340	Amborella trichopoda	3e-142	432	582	45.53
OS10G38050	Oryza sativa	2e-139	424	576	44.27
AT1G12570	Arabidopsis thaliana	6e-139	423	606	41.75
OS04G48400	Oryza sativa	3e-137	419	614	43.00
AT5G51950	Arabidopsis thaliana	1e-136	417	589	42.44
AT1G72970	Arabidopsis thaliana	8e-135	413	561	43.32
OS02G45530	Oryza sativa	4e-134	411	577	44.02
AT3G56060	Arabidopsis thaliana	1e-132	407	567	42.50
ATR_00036G00190	Amborella trichopoda	2e-131	404	598	41.47
OS03G02700	Oryza sativa	1e-129	399	582	42.96
OS09G19930	Oryza sativa	1e-128	397	559	43.47
PP00078G00400	Physcomitrella patens	8e-128	394	543	43.09
OS08G31030	Oryza sativa	6e-127	392	559	42.58
PP00003G02580	Physcomitrella patens	2e-122	382	580	41.55
AT1G14190	Arabidopsis thaliana	9e-119	369	541	39.56
AT5G51930	Arabidopsis thaliana	2e-117	367	560	39.64
PP00085G00680	Physcomitrella patens	1e-116	366	569	40.60
AT1G14185	Arabidopsis thaliana	3e-114	357	542	39.48
PP00078G00390	Physcomitrella patens	1e-100	321	525	39.43
PP00472G00030	Physcomitrella patens	6e-92	298	545	36.70
ATR_00028G00950	Amborella trichopoda	2e-51	184	253	42.69
ATR_00028G00930	Amborella trichopoda	3e-50	181	255	44.71
OS05G49000	Oryza sativa	5e-39	149	93	83.87
ATR_00028G00960	Amborella trichopoda	3e-34	133	215	41.40
phs197510	Phytophtora sojae	1e-33	139	575	26.96
ATR_00010G04850	Amborella trichopoda	4e-31	127	430	27.91
ES0003G00250	Ectocarpus siliculosus	9e-31	130	597	25.46
phs198830	Phytophtora sojae	3e-30	129	577	28.08
VC00G100730	Volvox carteri	4e-28	122	644	26.09
FBgn0030592	Drosophila melanogaster	1e-26	119	593	25.30
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	5e-26	117	597	24.79
FBgn0030587	Drosophila melanogaster	7e-25	113	598	25.59
CR12G06760	Chlamydomonas reinhardtii	3e-24	111	603	25.70
FBgn0001112	Drosophila melanogaster	3e-24	111	574	24.91
FBgn0030596	Drosophila melanogaster	5e-24	110	617	27.07
ENSG00000016391	Homo sapiens	5e-23	107	572	27.45
FBgn0266435	Drosophila melanogaster	5e-23	107	607	24.55
CNC64A_037G00370	Chlorella sp NC64A	6e-23	107	595	24.71
emh310600	Emiliania huxleyi	2e-22	105	614	27.04
CV00G70600	Coccomyxa subellipsoidea C-169	3e-22	105	342	31.58
ccr36220	Chondrus crispus	8e-22	103	589	27.67
FBgn0030590	Drosophila melanogaster	4e-21	102	599	23.87
FC007G06160	Fragilariopsis cylindrus	6e-21	100	589	24.62
PTI_02G04580	Phaeodactylum tricornutum	9e-21	100	602	24.75
Naga_100099g13	Nannochloropsis gaditana	1e-20	100	646	25.54
ATR_00028G00940	Amborella trichopoda	2e-20	94.0	217	34.56
Naga_100040g2	Nannochloropsis gaditana	6e-20	96.7	355	28.45
FBgn0030588	Drosophila melanogaster	6e-20	97.8	594	23.57
FBgn0030589	Drosophila melanogaster	1e-19	96.7	608	24.51
PI00G68540	Picochlorum sp. SENEW3 (SE3)	2e-19	96.3	625	23.04
WBGene00007917	Caenorhabditis elegans	2e-18	93.2	580	22.76
ccr175760	Chondrus crispus	2e-18	93.2	593	25.63
FBgn0030597	Drosophila melanogaster	2e-18	92.8	621	24.96
FBgn0030593	Drosophila melanogaster	2e-18	92.8	598	24.25
PTI_02G04520	Phaeodactylum tricornutum	5e-18	91.7	553	25.68
FBgn0030586	Drosophila melanogaster	5e-18	91.7	323	30.03
FBgn0039415	Drosophila melanogaster	1e-17	90.5	322	31.37
FC027G00320	Fragilariopsis cylindrus	2e-17	89.4	589	23.60
phs198930	Phytophtora sojae	4e-17	89.0	583	23.16
RCC4223.04g05780	Picochlorum_RCC4223	8e-17	87.8	636	23.43
AA0010G01840	Aureococcus anophagefferens	3e-16	85.9	580	24.48
emh197990	Emiliania huxleyi	7e-16	85.1	605	26.78
emh706340	Emiliania huxleyi	7e-16	85.1	605	26.78
ccr51120	Chondrus crispus	1e-15	84.7	591	26.06
FBgn0030598	Drosophila melanogaster	1e-15	84.0	316	26.90
FBgn0030594	Drosophila melanogaster	3e-15	83.2	577	23.40
Naga_100105g4	Nannochloropsis gaditana	2e-14	80.5	381	29.92
FC014G01320	Fragilariopsis cylindrus	2e-14	80.1	422	24.41
Naga_100225g10	Nannochloropsis gaditana	1e-13	77.8	501	26.95
emh610010	Emiliania huxleyi	1e-13	77.8	326	28.22
emh381540	Emiliania huxleyi	2e-12	74.3	333	27.63
CM16G00880	Cyanidioschyzon merolae	6e-12	72.4	611	23.57
phs157680	Phytophtora sojae	6e-12	72.4	590	26.10
TP08G04640	Thalassiosira pseudonana	1e-11	71.6	331	26.28
ATR_00028G00970	Amborella trichopoda	3e-11	67.4	106	36.79
ES0475G00020	Ectocarpus siliculosus	5e-11	69.3	316	26.27
ES0089G00140	Ectocarpus siliculosus	1e-08	62.0	348	26.15
gsu91210	Galdieria sulphuraria	3e-08	59.3	69	50.72
AA0005G05800	Aureococcus anophagefferens	5e-08	60.5	597	24.96
AA0005G05600	Aureococcus anophagefferens	6e-07	53.5	151	32.45
OS03G10670	Oryza sativa	2e-06	51.6	30	80.00

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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