Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G12150	Oryza sativa	0.0	622	308	100.00
OS02G51410	Oryza sativa	5e-164	466	314	78.34
OS04G54800	Oryza sativa	1e-118	350	287	64.81
AT2G21940	Arabidopsis thaliana	1e-89	276	216	61.11
ATR_00010G03260	Amborella trichopoda	5e-83	260	174	71.84
AT4G39540	Arabidopsis thaliana	7e-77	244	234	54.27
PP00374G00090	Physcomitrella patens	2e-45	163	206	42.23
PP00103G00340	Physcomitrella patens	1e-44	160	211	42.65
ATR_00016G01460	Amborella trichopoda	2e-44	160	204	45.10
CR10G04120	Chlamydomonas reinhardtii	2e-42	155	174	47.13
VC00G22330	Volvox carteri	2e-39	147	180	43.33
HE0000G28310	Helicosporidium sp.	3e-36	136	172	45.93
PI00G45970	Picochlorum sp. SENEW3 (SE3)	5e-36	137	177	42.37
RCC4223.09g02020	Picochlorum_RCC4223	1e-35	135	204	38.73
CNC64A_005G00880	Chlorella sp NC64A	3e-35	134	131	50.38
MP15G00950	Micromonas pusilla strain CCMP1545	4e-35	134	200	39.50
AT3G26900	Arabidopsis thaliana	1e-34	133	203	39.41
CV00G02600	Coccomyxa subellipsoidea C-169	3e-34	129	160	45.00
CV00G92080	Coccomyxa subellipsoidea C-169	9e-34	129	179	45.81
MRCC299_13G02500	Micromonas sp RCC299	6e-33	127	168	41.07
AA0016G01800	Aureococcus anophagefferens	2e-31	120	156	44.23
BPRRCC1105_06G03200	Bathycoccus prasinos	3e-31	124	191	36.13
PTI_22G00170	Phaeodactylum tricornutum	1e-30	122	197	39.59
AC00G93160	Asterochloris sp. Cgr-DA1pho v2.0	3e-30	116	120	47.50
CM20G00930	Cyanidioschyzon merolae	6e-29	117	169	44.97
ES0082G00160	Ectocarpus siliculosus	3e-28	114	190	38.95
FC012G03350	Fragilariopsis cylindrus	7e-28	111	158	42.41
OL20G03000	Ostreococcus lucimarinus	8e-27	108	161	37.89
TP09G02450	Thalassiosira pseudonana	6e-26	105	156	41.03
Naga_100108g2	Nannochloropsis gaditana	1e-24	107	179	37.99
ORCC809_20G02960	Ostreococcus sp RCC809	3e-24	103	163	36.20
OT_14G03090	Ostreococcus tauri	3e-24	103	205	32.68
OS01G01302	Oryza sativa	4e-22	97.8	202	26.73
OM_13G00350	Ostreococcus mediterraneus	2e-21	95.9	167	32.93
gsu35990	Galdieria sulphuraria	3e-20	90.5	95	48.42
gsu69070	Galdieria sulphuraria	3e-19	87.4	187	30.48
RCC4223.104g00190	Picochlorum_RCC4223	2e-13	70.9	132	33.33
PP00051G00570	Physcomitrella patens	2e-12	68.2	91	38.46
SPAC1834.02	Schizosaccharomyces pombe	8e-08	57.8	82	40.24
MP04G06870	Micromonas pusilla strain CCMP1545	1e-06	53.1	122	30.33
ENSMUSG00000048550	Mus musculus	4e-06	52.4	161	26.71
YDR127W	Saccharomyces cerevisiae strain S288C	4e-06	52.4	85	32.94

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment