Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G09450	Oryza sativa	0.0	1686	809	100.00
OS03G28330	Oryza sativa	0.0	1405	808	80.82
OS07G42490	Oryza sativa	0.0	1386	808	79.83
ATR_00106G00050	Amborella trichopoda	0.0	1281	804	74.63
AT3G43190	Arabidopsis thaliana	0.0	1276	798	75.31
AT5G20830	Arabidopsis thaliana	0.0	1240	800	73.62
OS03G22120	Oryza sativa	0.0	1203	802	70.57
AT4G02280	Arabidopsis thaliana	0.0	1199	804	69.40
AT5G49190	Arabidopsis thaliana	0.0	1183	802	69.20
PP00028G02030	Physcomitrella patens	0.0	1093	805	64.35
PP00120G00370	Physcomitrella patens	0.0	1073	779	65.08
PP00093G00500	Physcomitrella patens	0.0	1071	812	61.82
PP00303G00240	Physcomitrella patens	0.0	1065	802	64.09
AT1G73370	Arabidopsis thaliana	0.0	939	806	55.71
OS04G24430	Oryza sativa	0.0	935	814	54.91
ATR_00044G00210	Amborella trichopoda	0.0	934	809	54.76
OS02G58480	Oryza sativa	0.0	918	807	55.14
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	890	728	58.38
AT5G37180	Arabidopsis thaliana	0.0	882	776	53.74
OS04G17650	Oryza sativa	0.0	879	772	55.44
RCC4223.04g06590	Picochlorum_RCC4223	0.0	841	803	51.18
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	835	790	51.27
HE0000G56330	Helicosporidium sp.	0.0	784	807	49.19
CNC64A_002G04500	Chlorella sp NC64A	0.0	693	734	48.77
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	694	804	46.89
AP00G37470	Auxenochlorella protothecoides	0.0	570	503	55.07
AP00G37480	Auxenochlorella protothecoides	3e-102	330	409	43.52
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	4e-41	164	543	26.70
gsu138950	Galdieria sulphuraria	1e-40	165	505	27.52
OS02G09170	Oryza sativa	3e-39	160	524	26.72
OS01G69030	Oryza sativa	1e-38	159	521	27.64
AT5G11110	Arabidopsis thaliana	2e-38	159	527	27.13
AT4G10120	Arabidopsis thaliana	5e-38	157	513	27.88
PI00G14670	Picochlorum sp. SENEW3 (SE3)	5e-38	157	572	26.40
OS06G43630	Oryza sativa	1e-37	155	527	27.13
OS08G20660	Oryza sativa	2e-37	155	526	27.38
RCC4223.05g02250	Picochlorum_RCC4223	3e-37	154	572	26.40
PP00066G01210	Physcomitrella patens	2e-36	152	549	25.50
ATR_00033G01740	Amborella trichopoda	3e-36	152	510	28.43
AT1G04920	Arabidopsis thaliana	6e-36	150	510	26.47
PP00131G00600	Physcomitrella patens	1e-35	149	552	24.82
ATR_00099G00850	Amborella trichopoda	5e-35	147	507	25.84
AT5G20280	Arabidopsis thaliana	2e-33	142	535	25.98
OS11G12810	Oryza sativa	3e-33	142	545	25.32
CV00G68630	Coccomyxa subellipsoidea C-169	9e-30	131	600	24.17
AP00G64190	Auxenochlorella protothecoides	1e-29	130	557	24.42
HE0000G57540	Helicosporidium sp.	6e-29	126	461	24.95
CNC64A_014G03230	Chlorella sp NC64A	3e-27	121	198	35.35
CR12G08850	Chlamydomonas reinhardtii	8e-26	119	208	35.10
DDB_G0272730	Dictyostelium discoideum	4e-08	60.5	226	25.22
ENSG00000119523	Homo sapiens	4e-06	53.9	258	24.03
CV00G77080	Coccomyxa subellipsoidea C-169	7e-06	53.1	148	27.70

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment